RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KPNA4O00629 521 aaPredicted RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 NDUFB2O95178 105 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 AMY1AP04745 511 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 AMY2AP04746 511 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 BRS3P32247 399 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 MDH1P40925 334 aaKnown RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 CDX1P47902 265 aaPredicted RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 SLC35B1P78383 322 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 FAM3AP98173 230 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 BDH1Q02338 343 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 TOP3AQ13472 1001 aaPredicted RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 TMEM200BQ69YZ2 307 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 KCTD18Q6PI47 426 aaPredicted RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 EPGNQ6UW88 154 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 CCDC121Q6ZUS5 278 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 LHFPL2Q6ZUX7 228 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 MEPCEQ7L2J0 689 aaKnown RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 PRSS45Q7RTY3 260 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 ZNF429Q86V71 674 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 FUNDC1Q8IVP5 155 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 DDB2Q92466 427 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 SPDL1Q96EA4 605 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 RAX2Q96IS3 184 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 SPATA25Q9BR10 227 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 ZNF649Q9BS31 505 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 IKZF5Q9H5V7 419 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 B9D1Q9UPM9 204 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OR5B21A6NL26 309 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 ELANEP08246 267 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 IFI30P13284 250 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 VMACQ2NL98 169 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 SNAI3Q3KNW1 292 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 C6orf10Q5SRN2 563 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 Q6ZSR3 168 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 CROCCP2Q86T23 111 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OAFQ86UD1 273 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 RBM45Q8IUH3 476 aaKnown RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 ZNF695Q8IW36 515 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 PGAM4Q8N0Y7 254 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 MREGQ8N565 214 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 C19orf18Q8NEA5 215 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OR8J3Q8NGG0 315 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OR56B2PQ8NGI1 322 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OR2AJ1Q8NGZ0 328 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 LINC00476Q8WZB0 136 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 KRCC1Q9NPI7 259 aaPredicted RBP3.61□□□□□ -1.83
SNCA-213ENST00000618500 C19orf12Q9NSK7 152 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 TBC1D23Q9NUY8 699 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 MRGBPQ9NV56 204 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 PNPOQ9NVS9 261 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 RBMY1BA6NDE4 496 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 RBMY1EA6NEQ0 496 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 FAM220BPB1ANY3 271 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 LY6LH3BQJ8 138 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 M0QX08 132 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 CCL24O00175 119 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SLC16A7O60669 478 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 IGHG2P01859 326 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 LCATP04180 440 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ARG1P05089 322 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 RBMY1DP0C7P1 496 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 PSG2P11465 335 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ZNF823P16415 610 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ERP29P30040 261 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 CEBPDP49716 269 aaPredicted RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR12D2P58182 307 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 STX1BP61266 288 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 KLHL12Q53G59 568 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 CCDC144NLQ6NUI1 221 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SLC16A12Q6ZSM3 486 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ZNF826PQ6ZT77 177 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 PDZD9Q8IXQ8 264 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 BHLHE23Q8NDY6 225 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR8S1Q8NH09 359 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 AENQ8WTP8 325 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 SLC7A6Q92536 515 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 CORO2AQ92828 525 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 NKX3-1Q99801 234 aaPredicted RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 SH3GL1Q99961 368 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 FUZQ9BT04 418 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR51I2Q9H344 312 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 RABEP2Q9H5N1 569 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ENPP5Q9UJA9 477 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SIGLEC7Q9Y286 467 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 UBE2J1Q9Y385 318 aaPredicted RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 hCG_1807616A0A1W2PRN6 198 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 A0A1W2PRX2 142 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 A6NLC8 198 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 RENP00797 406 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 GRPP07492 148 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 MPZP25189 248 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 GPR12P47775 334 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 BLVRAP53004 296 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 NME5P56597 212 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 BLCAPP62952 87 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 EBI3Q14213 229 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SMIM21Q3B7S5 101 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 PAGE3Q5JUK9 113 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms