RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 IGHV2-70DA0A0C4DH43 119 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 LOC100130705A0A1B0GUX0 176 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 ANKRD65E5RJM6 399 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 H3BSH0 61 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 LHBP01229 141 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 GABRB1P18505 474 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 GNG3P63215 75 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 TEX36Q5VZQ5 186 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 BTNL3Q6UXE8 466 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 MOB3CQ70IA8 216 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 DOK3Q7L591 496 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 SCCPDHQ8NBX0 429 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 NANPQ8TBE9 248 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 RORBQ92753 470 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 ITFG2Q969R8 447 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 PLEKHA1Q9HB21 404 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 SMURF1Q9HCE7 757 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 FAM118AQ9NWS6 357 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 ERVK-18Q9QC07 812 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 AUP1Q9Y679 476 aa13.31□□□□□ -0.28
BRCA1-228ENST00000618469 MEGF8Q7Z7M0 2845 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 A0A1B0GTI1 187 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 A0A1B0GVI7 797 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 DAPL1A0PJW8 107 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 OR5B21A6NL26 309 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 SRRM5B3KS81 715 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF732B4DXR9 585 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-228ENST00000618469 MPZL2O60487 215 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 VENTXO95231 258 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 DBTP11182 482 aaKnown RBP13.3□□□□□ -0.28
BRCA1-228ENST00000618469 PEX2P28328 305 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 NPY4RP50391 375 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 PAX2Q02962 417 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 MICBQ29980 383 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 CEACAM21Q3KPI0 293 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF841Q6ZN19 808 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF555Q8NEP9 628 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 LGALS12Q96DT0 336 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 SEH1LQ96EE3 360 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 RDH12Q96NR8 316 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 GPR173Q9NS66 373 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 DNAJB11Q9UBS4 358 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 V9GYS6 101 aa13.3□□□□□ -0.28
BRCA1-228ENST00000618469 A6NIN4 97 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 C22orf46C9J442 243 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 TMPRSS2O15393 492 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 SYT7O43581 403 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 NDUFA2O43678 99 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 NRASP01111 189 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 FSHBP01225 129 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 MUC1P15941 1255 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-228ENST00000618469 CCL1P22362 96 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 ISL1P61371 349 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 ELF3P78545 371 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-228ENST00000618469 CDONQ4KMG0 1287 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 CLVS2Q5SYC1 327 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 KRT74Q7RTS7 529 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 ACBD7Q8N6N7 88 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 RAB40AQ8WXH6 277 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 DACT3Q96B18 629 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-228ENST00000618469 Q96MT0 163 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 NUDT16L1Q9BRJ7 211 aaKnown RBP13.29□□□□□ -0.28
BRCA1-228ENST00000618469 WDR13Q9H1Z4 485 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 AMBNQ9NP70 447 aa13.29□□□□□ -0.28
BRCA1-228ENST00000618469 DOCK11Q5JSL3 2073 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 A0A1B0GW55 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 LOC107986453A0A1B0GWG9 222 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 J3QRE1 110 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DLGAP1O14490 977 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 SLC16A6O15403 523 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 AKR7A2O43488 359 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
BRCA1-228ENST00000618469 RHBDL1O75783 438 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 UBCP0CG48 685 aaKnown RBP13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 CFHR2P36980 270 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 KIR3DL2P43630 455 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 ACTA2P62736 377 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 ACTG2P63267 376 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 FAM76BQ5HYJ3 339 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 HAGHLQ6PII5 290 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-228ENST00000618469 DUX4L9Q6RFH8 374 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-228ENST00000618469 PRSS35Q8N3Z0 413 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 BPIFB2Q8N4F0 458 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 FAM216BQ8N7L0 139 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 OR5A2Q8NGI9 324 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 RHOXF1Q8NHV9 184 aa13.28□□□□□ -0.28
BRCA1-228ENST00000618469 APH1BQ8WW43 257 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms