RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 CSTL1Q9H114 145 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 TAS2R4Q9NYW5 299 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 B3GALT5Q9Y2C3 310 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 GJE1A6NN92 205 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 NUDT14O95848 222 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
PDE6A-205ENST00000617647 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 CD99P14209 185 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 GUCA1AP43080 201 aaPredicted RBP6.61□□□□□ -1.35
PDE6A-205ENST00000617647 FAM3BP58499 235 aaPredicted RBP6.61□□□□□ -1.35
PDE6A-205ENST00000617647 BTG2P78543 158 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 HTD2P86397 168 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 WFDC8Q8IUA0 241 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 OR4B1Q8NGF8 309 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 ANGPTL4Q9BY76 406 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 GLIPR2Q9H4G4 154 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 SMDT1Q9H4I9 107 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 Q9N2J8 555 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 SPHK2Q9NRA0 654 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 CLDND1Q9NY35 253 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 WASHC3Q9Y3C0 194 aa6.61□□□□□ -1.35
PDE6A-205ENST00000617647 NSG1A0A0A6YYJ2 146 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 A0A1W2PPC1 479 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ZBTB42B2RXF5 422 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 C1QTNF3-AMACRE9PGA6 284 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 H7C1C5 153 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 MSTNO14793 375 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ATXN7O15265 892 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ZNF823P16415 610 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CD33P20138 364 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 GLRA1P23415 457 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CEACAM6P40199 344 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 DUSP3P51452 185 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TMEM241Q24JQ0 296 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 SLC25A26Q70HW3 274 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 RD3Q7Z3Z2 195 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CBARPQ8N350 705 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 BHLHE23Q8NDY6 225 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 OR51A4Q8NGJ6 313 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 DIO2Q92813 273 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CTDSP1Q9GZU7 261 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 C1orf198Q9H425 327 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 C20orf141Q9NUB4 165 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HSPB7Q9UBY9 170 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 SERTAD3Q9UJW9 196 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 MRPS2Q9Y399 296 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 RHBDD3Q9Y3P4 386 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CXCL11O14625 94 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HCRTR2O43614 444 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 NXPH3O95157 252 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 GNRHRP30968 328 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 POLR2LP62875 67 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 BSXQ3C1V8 233 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 SNAI3Q3KNW1 292 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 KCTD18Q6PI47 426 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 FAM216AQ8WUB2 273 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ZG16BQ96DA0 208 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CST9LQ9H4G1 147 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HCFC1R1Q9NWW0 138 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PRSS50Q9UI38 385 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 LRP5LA4QPB2 252 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TNFRSF10CO14798 259 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 RBMXL2O75526 392 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HLA-GP17693 338 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HOXA11P31270 313 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 AMTP48728 403 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PGFP49763 221 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PDX1P52945 283 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CTXN1P60606 82 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 DLK2Q6UY11 383 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 RNASEH2CQ8TDP1 164 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 LOXL4Q96JB6 756 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 P4HTMQ9NXG6 502 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 KIAA1456Q9P272 454 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 UBE2J1Q9Y385 318 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TNFSF13O75888 250 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 IL6RP08887 468 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TDGF1P13385 188 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 HOXD9P28356 352 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 CSNK1A1P48729 337 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ELAVL3Q14576 367 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 MSMO1Q15800 293 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 OTPQ5XKR4 325 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TPRG1Q6ZUI0 275 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 Q6ZVU0 165 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 MED25Q71SY5 747 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 ZNF480Q8WV37 535 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PSMF1Q92530 271 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PINX1Q96BK5 328 aaKnown RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TM4SF18Q96CE8 201 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 GNPNAT1Q96EK6 184 aaPredicted RBP6.6□□□□□ -1.35
PDE6A-205ENST00000617647 TSSK2Q96PF2 358 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 KLK13Q9UKR3 277 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 KCNK6Q9Y257 313 aa6.6□□□□□ -1.35
PDE6A-205ENST00000617647 PDE4DIPQ5VU43 2346 aa6.59□□□□□ -1.35
PDE6A-205ENST00000617647 WDR81Q562E7 1941 aa6.59□□□□□ -1.35
PDE6A-205ENST00000617647 HIDE1A8MVS5 230 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms