RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MRI1Q9BV20 369 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 CHST5Q9GZS9 411 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 GPR160Q9UJ42 338 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 WASF3Q9UPY6 502 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 CTDSPLO15194 276 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 MTRF1O75570 445 aaKnown RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 CD37P11049 281 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 MPGP29372 298 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 WNT5AP41221 380 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 IDH3GP51553 393 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 SNU13P55769 128 aaKnown RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 TMEM50BP56557 158 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 RIPPLY1Q0D2K3 151 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 LINC00303Q3SY05 128 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 PRR30Q53SZ7 412 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 PLAC9Q5JTB6 97 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 TFAP2EQ6VUC0 442 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 Q6ZS92 163 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 CD163Q86VB7 1156 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 WNT2BQ93097 391 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 FOXRED1Q96CU9 486 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 NEK6Q9HC98 313 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 KCNK7Q9Y2U2 307 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 RAXQ9Y2V3 346 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 ESPL1Q14674 2120 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 ANKRD20A5PA0PJZ0 165 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 AQP7O14520 342 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 CDC14BO60729 498 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 NRASP01111 189 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 GABRA1P14867 456 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 GABRR1P24046 479 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 OR3A2P47893 321 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 OR56B2PQ8NGI1 322 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 OR51T1Q8NGJ9 327 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 OR4C16Q8NGL9 310 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 BCL2L2Q92843 193 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 RAB24Q969Q5 203 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 SARAFQ96BY9 339 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 UQCC2Q9BRT2 126 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 TINAGL1Q9GZM7 467 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 LPAR5Q9H1C0 372 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 DPAGT1Q9H3H5 408 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 ZNF230Q9UIE0 474 aaPredicted RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 RAB22AQ9UL26 194 aa6.74□□□□□ -1.33
NEK3-207ENST00000617054 RBMX2Q9Y388 322 aaKnown RBP6.74□□□□□ -1.33
NEK3-207ENST00000617054 hCG_38984A0A1B0GV85 526 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 H7C417 338 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 ARPC1BO15143 372 aaKnown RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 APOC1P02654 83 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 ERCC1P07992 297 aaPredicted RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 ANXA7P20073 488 aaKnown RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 KRTAP27-1Q3LI81 207 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 PLCXD3Q63HM9 321 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 RTL6Q6ICC9 239 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 IGFL3Q6UXB1 125 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 BAIAP2L2Q6UXY1 529 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 FJX1Q86VR8 437 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 CALHM1Q8IU99 346 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 OR51S1Q8NGJ8 323 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 OR6F1Q8NGZ6 308 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 SSC4DQ8WTU2 575 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 ZC3HAV1LQ96H79 300 aaKnown RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 ARHGAP5-AS1Q96IT6 56 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 POM121L2Q96KW2 1035 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 MICU1Q9BPX6 476 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 PAPOLGQ9BWT3 736 aaKnown RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 C1QTNF5Q9BXJ0 243 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 TMEM59Q9BXS4 323 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 MTFP1Q9UDX5 166 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 METTL21EPA6NDL7 271 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 TTLL8A6PVC2 850 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 TMEM14DPA8MWL7 114 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 MKRN2OSH3BPM6 223 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 SS18L1O75177 396 aaPredicted RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 HPXP02790 462 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 SELEP16581 610 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 CFPP27918 469 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 THBS4P35443 961 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 HOXA4Q00056 320 aaPredicted RBP6.73□□□□□ -1.33
NEK3-207ENST00000617054 ATAD3CQ5T2N8 411 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 DYRK2Q92630 601 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 ST6GAL2Q96JF0 529 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 FZR1Q9UM11 496 aa6.73□□□□□ -1.33
NEK3-207ENST00000617054 SVEP1Q4LDE5 3571 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 HTR3BO95264 441 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 MGMTP16455 207 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 GPM6AP51674 278 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 GMFBP60983 142 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
NEK3-207ENST00000617054 PLP2Q04941 152 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 TAF9Q16594 264 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ALKBH6Q3KRA9 238 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 ZNF260Q3ZCT1 412 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 SCGB2B2Q4G0G5 96 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 NKAPLQ5M9Q1 402 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 OR2T2Q6IF00 324 aa6.72□□□□□ -1.33
NEK3-207ENST00000617054 VHLLQ6RSH7 139 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms