RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CDCP2Q5VXM1 449 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 SHEQ5VZ18 495 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 WNT2BQ93097 391 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 DLL4Q9NR61 685 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ZSWIM8A7E2V4 1837 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ANKRD33BA6NCL7 494 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 PRR19A6NJB7 356 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 XRCC3O43542 346 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 CD79BP40259 229 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 TRAT1Q6PIZ9 186 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 NHLRC1Q6VVB1 395 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 C1orf174Q8IYL3 243 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 DERL3Q96Q80 235 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 PIGMQ9H3S5 423 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 METTL17Q9H7H0 456 aaPredicted RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 KCNIP2Q9NS61 270 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 SPTA1P02549 2419 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 A0A0D9SG52 128 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 NME2P1O60361 137 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 CDC14BO60729 498 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 DXOO77932 396 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 IGKV3-11P04433 115 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 NME2P22392 152 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 SSTR2P30874 369 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 PTGFRP43088 359 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 POU4F3Q15319 338 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 LYPD8Q6UX82 237 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF574Q6ZN55 896 aaPredicted RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 RFPL4BQ6ZWI9 263 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ZBTB44Q8NCP5 570 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 OR5T1Q8NG75 326 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 OR8B12Q8NGG6 310 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ZDHHC16Q969W1 377 aa8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 MRM2Q9UI43 246 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 ASCC3Q8N3C0 2202 aaKnown RBP8.35□□□□□ -1.07
CLTCL1-208ENST00000615606 A0A0B4J203 849 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 AGPAT2O15120 278 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 FCGR2CP31995 323 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF239Q16600 458 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SLC25A30Q5SVS4 291 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 CATSPERDQ86XM0 798 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 OR5D13Q8NGL4 314 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 OR14K1Q8NGZ2 314 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF385AQ96PM9 386 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ADAM19Q9H013 955 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 POFUT1Q9H488 388 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RANGRFQ9HD47 186 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 FABP1P07148 127 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 MDH2P40926 338 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 GSK3AP49840 483 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 BTG1P62324 171 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 PLA2G7Q13093 441 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 PRSS53Q2L4Q9 553 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SLC25A35Q3KQZ1 300 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 HIKESHIQ53FT3 197 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 DMRTC1Q5HYR2 192 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ABCA7Q8IZY2 2146 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SLC7A6Q92536 515 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 MS4A5Q9H3V2 200 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 GCM1Q9NP62 436 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RPA2P15927 270 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ARL3P36405 182 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RPL35P42766 123 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SCAND1P57086 179 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 TSPO2Q5TGU0 170 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 LYSMD2Q8IV50 215 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RBMXL3Q8N7X1 1067 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SEC22AQ96IW7 307 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 LAMP3Q9UQV4 416 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 TIMM8BQ9Y5J9 83 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 FLVCR1Q9Y5Y0 555 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 PTP4A3O75365 173 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 NTN1O95631 604 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ACSM4P0C7M7 580 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ASAH2BP0C7U1 165 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RAB13P51153 203 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 FUT5Q11128 374 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 DYRK1AQ13627 763 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 RNF32Q9H0A6 362 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 TAS2R5Q9NYW4 299 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 CACFD1Q9UGQ2 172 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 ERRFI1Q9UJM3 462 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 SIP14410 1827 aa8.34□□□□□ -1.07
CLTCL1-208ENST00000615606 TRAV38-1A0A0B4J264 116 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 C1orf196B1AJZ1 125 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 SDCBPO00560 298 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 ST8SIA5O15466 376 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 NGFP01138 241 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 AADACP22760 399 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 ZNF85Q03923 595 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 DBPQ10586 325 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 ATPAF1Q5TC12 328 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 SCNM1Q9BWG6 230 aa8.33□□□□□ -1.08
CLTCL1-208ENST00000615606 OR8U8P0C7N1 319 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms