RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 HIST1H2AAQ96QV6 131 aa13.96□□□□□ -0.17
CBWD3-211ENST00000615061 TMPRSS13Q9BYE2 586 aa13.96□□□□□ -0.17
CBWD3-211ENST00000615061 GPR173Q9NS66 373 aa13.96□□□□□ -0.17
CBWD3-211ENST00000615061 CTSZQ9UBR2 303 aa13.96□□□□□ -0.17
CBWD3-211ENST00000615061 RPL36Q9Y3U8 105 aaKnown RBP13.96□□□□□ -0.17
CBWD3-211ENST00000615061 PCDHGB1Q9Y5G3 927 aa13.96□□□□□ -0.17
CBWD3-211ENST00000615061 OOEPA6NGQ2 149 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 ZNF732B4DXR9 585 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 SYT7O43581 403 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 FOXH1O75593 365 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 FADS2O95864 444 aaKnown RBP13.96□□□□□ -0.18
CBWD3-211ENST00000615061 NRASP01111 189 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 GYPAP02724 150 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 RAB40BQ12829 278 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 GALEQ14376 348 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 ESCO2Q56NI9 601 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 DCAF12L2Q5VW00 463 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 DCDC5Q6ZRR9 648 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 Q6ZSR3 168 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 DOK3Q7L591 496 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 NRG4Q8WWG1 115 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 WDR13Q9H1Z4 485 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 RNPEPL1Q9HAU8 725 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 ABCB9Q9NP78 766 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 MRPS18AQ9NVS2 196 aaKnown RBP13.96□□□□□ -0.18
CBWD3-211ENST00000615061 ERVK13-1Q9NX77 482 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 FRRS1LQ9P0K9 344 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 MIOXQ9UGB7 285 aa13.96□□□□□ -0.18
CBWD3-211ENST00000615061 LOC105371242A0A075B767 164 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 A0A0G2JMP0 313 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 A0A0X1KG70 313 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 A0A1B0GVI7 797 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 LOC107986453A0A1B0GWG9 222 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 TMEM210A6NLX4 147 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 A8MXK9 166 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 AKR7A2O43488 359 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 RHBDL1O75783 438 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 PCMT1P22061 227 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 ZBTB37Q5TC79 503 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 TMEM42Q69YG0 159 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 OR4M2Q8NGB6 313 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 NEIL1Q96FI4 390 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-211ENST00000615061 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-211ENST00000615061 LRCH1Q9Y2L9 728 aa13.95□□□□□ -0.18
CBWD3-211ENST00000615061 TNFRSF13BO14836 293 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-211ENST00000615061 ADRA2CP18825 462 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 CAPGP40121 348 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 PITPNBP48739 271 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 GNB2P62879 340 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 GNG3P63215 75 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 CLVS2Q5SYC1 327 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 TEX36Q5VZQ5 186 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 ZNF841Q6ZN19 808 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 KCTD20Q7Z5Y7 419 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR8B3Q8NGG8 313 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR8B2Q96RD0 313 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR51I2Q9H344 312 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 TRAV38-1A0A0B4J264 116 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 A0A1B0GW55 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 SRRM5B3KS81 715 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 E9PI62 339 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 FCN3O75636 299 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 HTR1AP08908 422 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L2P0CJ85 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L3P0CJ86 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L4P0CJ87 422 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L5P0CJ88 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L6P0CJ89 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L7P0CJ90 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 LIMS3P0CW19 117 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 LIMS4P0CW20 117 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 SRP14P37108 136 aaKnown RBP13.94□□□□□ -0.18
CBWD3-211ENST00000615061 ACTA2P62736 377 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 ACTG2P63267 376 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4L9Q6RFH8 374 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-211ENST00000615061 NLRC3Q7RTR2 1065 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR5T2Q8NGG2 359 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR5A2Q8NGI9 324 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 OR10AC1Q8NH08 325 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 C7orf69Q9H7B7 122 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 DUX4Q9UBX2 424 aa13.94□□□□□ -0.18
CBWD3-211ENST00000615061 POLR3KQ9Y2Y1 108 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-211ENST00000615061 ADAM20O43506 726 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 TFF1P04155 84 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 CFHR2P36980 270 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 PAX2Q02962 417 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 KLHL22Q53GT1 634 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-211ENST00000615061 LAIR2Q6ISS4 152 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 FDX2Q6P4F2 183 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 HAGHLQ6PII5 290 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-211ENST00000615061 SETD9Q8NE22 299 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 OR51A4Q8NGJ6 313 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 NPRL2Q8WTW4 380 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 ITFG2Q969R8 447 aa13.93□□□□□ -0.18
CBWD3-211ENST00000615061 PLEKHA1Q9HB21 404 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms