RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CAV3P56539 151 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ERVS71-1P61550 626 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 BSPH1Q075Z2 132 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 SPOCK1Q08629 439 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 CNN3Q15417 329 aaKnown RBP9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ZNF718Q3SXZ3 478 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 BEX5Q5H9J7 111 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 RGS7BPQ6MZT1 257 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MCFD2Q8NI22 146 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ACOT12Q8WYK0 555 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 FOXRED1Q96CU9 486 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-212ENST00000613856 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MBD6Q96DN6 1003 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 RADILQ96JH8 1075 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MRI1Q9BV20 369 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 METTL17Q9H7H0 456 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ZNF442Q9H7R0 627 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 NEK6Q9HC98 313 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ABCB9Q9NP78 766 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MRPL15Q9P015 296 aaKnown RBP9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MPC1Q9Y5U8 109 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 A6NIN4 97 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 ANKRD30BLA7E2S9 258 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 SLC17A2O00624 439 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 ABCD4O14678 606 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 GMDSO60547 372 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 NRASP01111 189 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 PRKACBP22694 351 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 AZGP1P25311 298 aaKnown RBP9.77□□□□□ -0.85
SLIRP-212ENST00000613856 GCH1P30793 250 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 MPV17P39210 176 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 RANBP1P43487 201 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 PRSS12P56730 875 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 SCAND1P57086 179 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 PSG7Q13046 419 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 UBE2V2Q15819 145 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 C1orf100Q5SVJ3 147 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 DDI2Q5TDH0 399 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 FAM166AQ6J272 317 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 DNAAF1Q8NEP3 725 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 OR6M1Q8NGM8 313 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 LINC01560Q8TB33 94 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 TMEM171Q8WVE6 324 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 CPNE2Q96FN4 548 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-212ENST00000613856 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 PAPOLGQ9BWT3 736 aaKnown RBP9.77□□□□□ -0.85
SLIRP-212ENST00000613856 SMURF1Q9HCE7 757 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 ABRACLQ9P1F3 81 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 PURGQ9UJV8 347 aaKnown RBP9.77□□□□□ -0.85
SLIRP-212ENST00000613856 RHBDD3Q9Y3P4 386 aa9.77□□□□□ -0.85
SLIRP-212ENST00000613856 IGLV3-9A0A075B6K5 115 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-212ENST00000613856 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 INAFM1C9JVW0 142 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 MAGEB3O15480 346 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 CD3EP07766 207 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 CAPZA1P52907 286 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 PRDX4Q13162 271 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 RIN1Q13671 783 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 TMEM255AQ5JRV8 349 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 IDNKQ5T6J7 187 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 PLCXD3Q63HM9 321 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 OR2T2Q6IF00 324 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 LHFPL2Q6ZUX7 228 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 ZDHHC23Q8IYP9 409 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 OR52N4Q8NGI2 321 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 PLPPR2Q96GM1 343 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 SLC22A4Q9H015 551 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 PLEKHF2Q9H8W4 249 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 GPR173Q9NS66 373 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 STEAP1Q9UHE8 339 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 DAPK2Q9UIK4 370 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 NOP16Q9Y3C1 178 aaKnown RBP9.76□□□□□ -0.85
SLIRP-212ENST00000613856 PEX16Q9Y5Y5 336 aa9.76□□□□□ -0.85
SLIRP-212ENST00000613856 OR5B21A6NL26 309 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 ZNF850A8MQ14 1090 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 DEFB108AA8MXU0 73 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 SHISA9B4DS77 424 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 IGHV3-13P01766 116 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 HCKP08631 526 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 OCMP0CE72 109 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-212ENST00000613856 CALCBP10092 127 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 SLC2A2P11168 524 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-212ENST00000613856 LOXP28300 417 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-212ENST00000613856 ZNF93P35789 620 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-212ENST00000613856 FUT6P51993 359 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 KLF3P57682 345 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-212ENST00000613856 LSAMPQ13449 338 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 RAB11BQ15907 218 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 MSMPQ1L6U9 139 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 CEACAM21Q3KPI0 293 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 MZT2AQ6P582 158 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 CRIP3Q6Q6R5 217 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 SLC22A25Q6T423 547 aa9.75□□□□□ -0.85
SLIRP-212ENST00000613856 JAGN1Q8N5M9 183 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms