RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 NEIL1Q96FI4 390 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 P2RY12Q9H244 342 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 KIR3DX1Q9H7L2 352 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 KIAA1456Q9P272 454 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 ZFC3H1O60293 1989 aaKnown RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 SCN9AQ15858 1988 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 UPK1AO00322 258 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 PHF1O43189 567 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-213ENST00000613099 KCNQ2O43526 872 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TSPAN6O43657 245 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 OR4Q2P0C623 313 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 DANCRP0C864 163 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 POU2AF1Q16633 256 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 TTTY10Q9BZA0 68 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 EPHX3Q9H6B9 360 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 Q9N2J8 555 aa4.48□□□□□ -1.69
VPS13D-213ENST00000613099 HELTA6NFD8 242 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FAM24AA6NFZ4 105 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 LCATP04180 440 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ERGP11308 486 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 SELENOTP62341 195 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 IHHQ14623 411 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 PIP5KL1Q5T9C9 394 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RNF165Q6ZSG1 346 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 BHLHE23Q8NDY6 225 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FBXO34Q9NWN3 711 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TNFSF13O75888 250 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 PRNPP04156 253 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HTR1DP28221 377 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 NTSR1P30989 418 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 THBS2P35442 1172 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HAPLN2Q9GZV7 340 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 LIN7CQ9NUP9 197 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TRBV9A0A0B4J1U6 114 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 SLC31A1O15431 190 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CTXN2P0C2S0 81 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FBXO45P0C2W1 286 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RAB38P57729 211 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 IL24Q13007 206 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ACKR1Q16570 336 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 MPV17LQ2QL34 196 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TRMT12Q53H54 448 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TPTE2P1Q5T6R2 138 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 MDGA1Q8NFP4 955 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 BORCS8Q96FH0 119 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ATP6V0BQ99437 205 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 DUSP11O75319 330 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FBLP22087 321 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 GJA4P35212 333 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 P2RY1P47900 373 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF253O75346 499 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ANKRD34AQ69YU3 496 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR10G8Q8NGN5 311 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 NKX3-1Q99801 234 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 GINS3Q9BRX5 216 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RHNO1Q9BSD3 238 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HEXA-AS1Q9H8Q6 139 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 YJEFN3A6XGL0 299 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 MALLQ13021 153 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 KTI12Q96EK9 354 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ADAT1Q9BUB4 502 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 SFT2D2O95562 160 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 FPR2P25090 351 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RPEL1Q2QD12 228 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CYB561A3Q8NBI2 242 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 DDAH2O95865 285 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF93P35789 620 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 CDKN2AP42771 156 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 SLC6A12P48065 614 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 ZNF133P52736 654 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 LSM6P62312 80 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 NKG7Q16617 165 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 PHF19Q5T6S3 580 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 TMEM164Q5U3C3 297 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RNASEKQ6P5S7 137 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 VSTM2BA6NLU5 285 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 IFITM10A6NMD0 228 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RPS18P62269 152 aaKnown RBP4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 RAB40CQ96S21 281 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR10A2Q9H208 303 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 LPAR2Q9HBW0 351 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 A0A1W2PQH9 124 aa4.47□□□□□ -1.69
VPS13D-213ENST00000613099 OR2M5A3KFT3 312 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms