RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TMEM91Q6ZNR0 172 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 C1QL2Q7Z5L3 287 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 OR1F12Q8NHA8 337 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 NANPQ8TBE9 248 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 THEM6Q8WUY1 208 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 RNF133Q8WVZ7 376 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 HAVCR1Q96D42 359 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 C7orf69Q9H7B7 122 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 TMEM106BQ9NUM4 274 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 DCAF16Q9NXF7 216 aa18.33■□□□□ 0.53
CBWD3-207ENST00000611426 TENM1Q9UKZ4 2725 aa18.33■□□□□ 0.52
CBWD3-207ENST00000611426 ARHGAP32A7KAX9 2087 aa18.33■□□□□ 0.52
CBWD3-207ENST00000611426 PNMA8CA0A1B0GUJ8 204 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 OR6C6A6NF89 314 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 MAGEB4O15481 346 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-207ENST00000611426 SERPINA3P01011 423 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 HNRNPA0Q13151 305 aaKnown RBP18.32■□□□□ 0.52
CBWD3-207ENST00000611426 EIF2B1Q14232 305 aaKnown RBP18.32■□□□□ 0.52
CBWD3-207ENST00000611426 CCDC92Q53HC0 331 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-207ENST00000611426 Q6ZR03 302 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 YIPF7Q8N8F6 280 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 GHSRQ92847 366 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 TMEM203Q969S6 136 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 MAP6Q96JE9 813 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 TMED9Q9BVK6 235 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 MROQ9BYG7 248 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 TTTY10Q9BZA0 68 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 RNF167Q9H6Y7 350 aa18.32■□□□□ 0.52
CBWD3-207ENST00000611426 IGHV2-70P01814 119 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 RPS27P42677 84 aaKnown RBP18.31■□□□□ 0.52
CBWD3-207ENST00000611426 HILS1P60008 231 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 ALKBH1Q13686 389 aaKnown RBP18.31■□□□□ 0.52
CBWD3-207ENST00000611426 TBC1D15Q8TC07 691 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 IL19Q9UHD0 177 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 IKZF2Q9UKS7 526 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 POLR1DQ9Y2S0 133 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 LHFPL6Q9Y693 200 aa18.31■□□□□ 0.52
CBWD3-207ENST00000611426 TRBV2A0A0J9YWF9 115 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 RER1O15258 196 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 FOXH1O75593 365 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 GATBO75879 557 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 DBHP09172 617 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 RBMXP38159 391 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OPRL1P41146 370 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 NANOS3P60323 173 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 C22orf42Q6IC83 251 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 DCXRQ7Z4W1 244 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 SPICQ8N5J4 248 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ZNF283Q8N7M2 679 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OR5L1Q8NGL2 311 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OR2G2Q8NGZ5 317 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 JMJD8Q96S16 334 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 PPP1R3CQ9UQK1 317 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OR4C45A6NMZ5 311 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 TRIM77I1YAP6 450 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 SRSF10O75494 262 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 RAC2P15153 192 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ZFP36P26651 326 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 RIDAP52758 137 aaKnown RBP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 RPS11P62280 158 aaKnown RBP eCLIP18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ACTG1P63261 375 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 HIST1H3AP68431 136 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 YIF1BQ5BJH7 314 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 HIST2H3PS2Q5TEC6 136 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 UNQ9370/PRO34162Q6UXP9 181 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 HIST2H3AQ71DI3 136 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OR5AS1Q8N127 324 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 GJC3Q8NFK1 279 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ITLN1Q8WWA0 313 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 CDADC1Q9BWV3 514 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 SUCNR1Q9BXA5 334 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 MMP27Q9H306 513 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 NIPAL2Q9H841 368 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 PTTG3PQ9NZH4 202 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 OPN4Q9UHM6 478 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 ZNF281Q9Y2X9 895 aa18.3■□□□□ 0.52
CBWD3-207ENST00000611426 A0A075B6Q4 140 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 TMEM212A6NML5 194 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 J3QW42 95 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 PSMB10P40306 273 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 MTNR1BP49286 362 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 HLXQ14774 488 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-207ENST00000611426 ZNF404Q494X3 552 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 TMEM155Q4W5P6 130 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 LRRN1Q6UXK5 716 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 KRT77Q7Z794 578 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 LRRC28Q86X40 367 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-207ENST00000611426 BPIFB2Q8N4F0 458 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 FAM216AQ8WUB2 273 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 SLC25A46Q96AG3 418 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 OR2V2Q96R30 315 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 SLC6A7Q99884 636 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 ATPIF1Q9UII2 106 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 LRP12Q9Y561 859 aa18.29■□□□□ 0.52
CBWD3-207ENST00000611426 PPIAL4EA0A075B759 164 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 PPIAL4CA0A0B4J2A2 164 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 PPIAL4DF5H284 164 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 ZFPL1O95159 310 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 PPIAL4FP0DN26 164 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms