RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ATXN7L3Q14CW9 347 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TGIF1Q15583 401 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR1Q1Q15612 314 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 FAM189A2Q15884 450 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LRRC37A5PQ49AS3 106 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 DUSP28Q4G0W2 176 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 MIDNQ504T8 468 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRMT12Q53H54 448 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM177Q53S58 311 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 C10orf120Q5SQS8 335 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LINC01590Q5TEZ4 76 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SDHAF4Q5VUM1 108 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LEMD1Q68G75 181 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR8G2PQ6IF36 304 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LEG1Q6P5S2 330 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SPSB3Q6PJ21 355 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 DPPA3Q6W0C5 159 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GDPD4Q6W3E5 623 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 Q7L0L9 218 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 NUP54Q7Z3B4 507 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 RD3Q7Z3Z2 195 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GALNTL5Q7Z4T8 443 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LINC01551Q86U37 167 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 RTN4RL1Q86UN2 441 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF429Q86V71 674 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LHFPL1Q86WI0 220 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMPRSS12Q86WS5 348 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF584Q8IVC4 421 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 H1FOOQ8IZA3 346 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 C1orf87Q8N0U7 546 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CFAP52Q8N1V2 620 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GBGT1Q8N5D6 347 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 DCAF4L2Q8NA75 395 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLEC18CQ8NCF0 446 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 NPEPL1Q8NDH3 523 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR2L3Q8NG85 312 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR4X1Q8NH49 305 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 OR14L1PQ8NHC6 308 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LIPHQ8WWY8 451 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 FGF13Q92913 245 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF689Q96CS4 500 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 RBMXL1Q96E39 390 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 BOD1Q96IK1 185 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 BTF3L4Q96K17 158 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GPX7Q96SL4 187 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 AIF1LQ9BQI0 150 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 PCBD2Q9H0N5 130 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 PLK3Q9H4B4 646 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 KIR3DX1Q9H7L2 352 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LPAR2Q9HBW0 351 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LYRM2Q9NU23 88 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 HSPB7Q9UBY9 170 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 IL17BQ9UHF5 180 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GNG8Q9UK08 70 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CES1P1Q9UKY3 287 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC7A7Q9UM01 511 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF443Q9Y2A4 671 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMED7Q9Y3B3 224 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 PRKAB1Q9Y478 270 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM14AQ9Y6G1 99 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 NUMA1Q14980 2115 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRAV8-7A0A075B6U6 113 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TGIF2-C20orf24A0A0A6YYL0 155 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CCDC163A0A0D9SF12 145 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A1B0GU03 582 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 C13orf42A0A1B0GVH6 325 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TMEM235A6NFC5 223 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ARL5CA6NH57 179 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 A8MVM7 634 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 E5RGE8 158 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 K7ERQ8 282 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 M0QYG6 137 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CXCL11O14625 94 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 AGPAT2O15120 278 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CYB5BO43169 146 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PLRG1O43660 514 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 GPR137BO60478 399 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CTSVO60911 334 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CA11O75493 328 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 DEDDO75618 318 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 B3GAT3O94766 335 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SYNGR4O95473 234 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 DIRAS3O95661 229 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TBX18O95935 607 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CYB5R3P00387 301 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HPRT1P00492 218 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 HBE1P02100 147 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MBPP02686 304 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 UMODP07911 640 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 MRPL3P09001 348 aaKnown RBP3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC35G4P0C7Q5 338 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PGA4P0DJD7 388 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 PGA5P0DJD9 388 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 ESDP10768 282 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 TDGF1P13385 188 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 CEACAM1P13688 526 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 F3P13726 295 aa3.57□□□□□ -1.84
HMGB1P50-201ENST00000605814 IRF2P14316 349 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms