RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PLPP2O43688 288 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 GATBO75879 557 aaKnown RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 LALBAP00709 142 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 LHBP01229 141 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 IGHV2-70P01814 119 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 IRF2P14316 349 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 THBS2P35442 1172 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 GPM6AP51674 278 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 GABARAPL2P60520 117 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 SPHARQ15513 63 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 CEP78Q5JTW2 689 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 PLCXD3Q63HM9 321 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 MOB3CQ70IA8 216 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 BIVMQ86UB2 503 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 OR51A4Q8NGJ6 313 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 OR13C3Q8NGS6 347 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 ZNF420Q8TAQ5 688 aaPredicted RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 GPR148Q8TDV2 347 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 GHSRQ92847 366 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 ADAT3Q96EY9 351 aaPredicted RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 FGF23Q9GZV9 251 aaPredicted RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 OR51I2Q9H344 312 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 DCAF16Q9NXF7 216 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 ZNF281Q9Y2X9 895 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 LSM2Q9Y333 95 aaKnown RBP11.68□□□□□ -0.54
RNF40-212ENST00000602784 LRRC42Q9Y546 428 aa11.68□□□□□ -0.54
RNF40-212ENST00000602784 PQLC2LA1A4F0 135 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 LRP5LA4QPB2 252 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 A6NIN4 97 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 A6NLC8 198 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ZNF732B4DXR9 585 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 H3BSH0 61 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
RNF40-212ENST00000602784 LMX1BO60663 402 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ALX3O95076 343 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 MT-ND2P03891 347 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 HEXAP06865 529 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ZNF20P17024 532 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 CPT2P23786 658 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 EEF1B2P24534 225 aaKnown RBP11.67□□□□□ -0.54
RNF40-212ENST00000602784 MDH2P40926 338 aaKnown RBP11.67□□□□□ -0.54
RNF40-212ENST00000602784 BTG1P62324 171 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 GPR50Q13585 617 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ZMYND11Q15326 602 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 YIF1BQ5BJH7 314 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 MUC20Q8N307 709 aaPredicted RBP11.67□□□□□ -0.54
RNF40-212ENST00000602784 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 DNAAF1Q8NEP3 725 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 FGGYQ96C11 551 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ISYNA1Q9NPH2 558 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 GPR173Q9NS66 373 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 C1orf123Q9NWV4 160 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 SLC7A11Q9UPY5 501 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
RNF40-212ENST00000602784 CR1P17927 2039 aa11.67□□□□□ -0.54
RNF40-212ENST00000602784 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
RNF40-212ENST00000602784 PPIAL4FP0DN26 164 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 FUT6P51993 359 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 LMO4P61968 165 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 CNN3Q15417 329 aaKnown RBP11.66□□□□□ -0.54
RNF40-212ENST00000602784 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 AVPI1Q5T686 147 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 WDR82Q6UXN9 313 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 ZNF826PQ6ZT77 177 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 KCTD8Q6ZWB6 473 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 SPICQ8N5J4 248 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 SCCPDHQ8NBX0 429 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 MAPK1IP1LQ8NDC0 245 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 CLDND2Q8NHS1 167 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 RGP1Q92546 391 aaPredicted RBP11.66□□□□□ -0.54
RNF40-212ENST00000602784 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 OR5M11Q96RB7 305 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 CCDC90BQ9GZT6 254 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 DHDHQ9UQ10 334 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 MTORP42345 2549 aa11.66□□□□□ -0.54
RNF40-212ENST00000602784 TLN2Q9Y4G6 2542 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 TEP1Q99973 2627 aaKnown RBP11.65□□□□□ -0.54
RNF40-212ENST00000602784 CDIPTO14735 213 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 WNT9BO14905 357 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 CD2P06729 351 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
RNF40-212ENST00000602784 CELP19835 753 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 PRKACBP22694 351 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 GZMKP49863 264 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 MED22Q15528 200 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 TBCEQ15813 527 aaPredicted RBP11.65□□□□□ -0.54
RNF40-212ENST00000602784 KCNJ8Q15842 424 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms