RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	TBX1	O43435	398 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	XRCC2	O43543	280 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	NDUFA2	O43678	99 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	MITF	O75030	526 aa	Predicted RBP	12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	CLPX	O76031	633 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	GAST	P01350	101 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	SLC25A1	P53007	311 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	RPL15	P61313	204 aa	Known RBP	12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	IL5RA	Q01344	420 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	KLRD1	Q13241	179 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	RPL13AP3	Q6NVV1	102 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223		Q6ZSV7	163 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	RASSF6	Q6ZTQ3	369 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	PNKD	Q8N490	385 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	SPERT	Q8NA61	448 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	LY6G5B	Q8NDX9	201 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	OR1M1	Q8NGA1	313 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	OR8S1	Q8NH09	359 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	TBC1D15	Q8TC07	691 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	SGK3	Q96BR1	496 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	REEP6	Q96HR9	211 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	TSSK6	Q9BXA6	273 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	OPA3	Q9H6K4	179 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	MED20	Q9H944	212 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	C14orf119	Q9NWQ9	140 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	ONECUT1	Q9UBC0	465 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	DNAJB11	Q9UBS4	358 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	KPTN	Q9Y664	436 aa		12.06	□□□□□ -0.48
IRF3-223	ENST00000599223	ANKRD30BL	A7E2S9	258 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	RNASEK-C17orf49	H0YIS7	233 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223		H3BN98	237 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223		M0QZ24	198 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	ECD	O95905	644 aa	Predicted RBP	12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	ANXA2	P07355	339 aa	Known RBP	12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	GNAO1	P09471	354 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	OSM	P13725	252 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	FMO3	P31513	532 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	ZNF121	P58317	390 aa	Predicted RBP	12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	CDC42	P60953	191 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	IKZF1	Q13422	519 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	TAF13	Q15543	124 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	TIGD6	Q17RP2	521 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	GFOD2	Q3B7J2	385 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	TEX30	Q5JUR7	227 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	ZNF691	Q5VV52	312 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	STUM	Q69YW2	141 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223		Q8N7P7	452 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	PRRG3	Q9BZD7	231 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	TLNRD1	Q9H1K6	362 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	WDR13	Q9H1Z4	485 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	CNTD2	Q9H8S5	307 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	IMPAD1	Q9NX62	359 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	DNAJC27	Q9NZQ0	273 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	ZNRD1	Q9P1U0	126 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223	RHBDD3	Q9Y3P4	386 aa		12.05	□□□□□ -0.48
IRF3-223	ENST00000599223		A0A1B0GVI7	797 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223		A0A1W2PRD5	423 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223		A0A1W2PRF3	423 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223		A0A1W2PRM7	423 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	FAM183A	A6NL82	134 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	MPZL2	O60487	215 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	MUC1	P15941	1255 aa	Predicted RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	POU1F1	P28069	291 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	GSK3A	P49840	483 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	GMFB	P60983	142 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	GRB2	P62993	217 aa	Known RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	EIF2B1	Q14232	305 aa	Known RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	MICB	Q29980	383 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	RBM48	Q5RL73	367 aa	Known RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	CD300LD	Q6UXZ3	194 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	FAM57B	Q71RH2	274 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	DPY19L4	Q7Z388	723 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	C1QL4	Q86Z23	238 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	IQCF1	Q8N6M8	205 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	OR5T2	Q8NGG2	359 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	RNF133	Q8WVZ7	376 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	ITPKC	Q96DU7	683 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	NIPSNAP1	Q9BPW8	284 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	ABHD6	Q9BV23	337 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	PAPOLG	Q9BWT3	736 aa	Known RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	VPREB3	Q9UKI3	123 aa		12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	TET2	Q6N021	2002 aa	Predicted RBP	12.04	□□□□□ -0.48
IRF3-223	ENST00000599223	SLC22A31	A6NKX4	558 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	CDIPT	O14735	213 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	TIMM23	O14925	209 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	CLIC3	O95833	236 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	ACKR3	P25106	362 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	DDOST	P39656	456 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	OPRL1	P41146	370 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	CRISP1	P54107	249 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	MZT1	Q08AG7	82 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	C11orf91	Q3C1V1	193 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	KCTD21	Q4G0X4	260 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	HIST2H2BD	Q6DRA6	164 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	METAP1D	Q6UB28	335 aa	Predicted RBP	12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	ERI1	Q8IV48	349 aa	Known RBP	12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	OR2T33	Q8NG76	320 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	OR6N2	Q8NGY6	317 aa		12.03	□□□□□ -0.48
IRF3-223	ENST00000599223	TEX47	Q8TBZ9	253 aa		12.03	□□□□□ -0.48

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