RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TRAV38-1A0A0B4J264 116 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 CENPVL3A0A0U1RRI6 287 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 A0A1B0GW55 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 hCG_1807616A0A1W2PRN6 198 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ACOD1A6NK06 481 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 SRRM5B3KS81 715 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 PSMD9O00233 223 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 CASQ2O14958 399 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-202ENST00000597453 KCNAB3O43448 404 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 MPZL2O60487 215 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ENTPD6O75354 484 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 LHBP01229 141 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 OR2T7P0C7T2 308 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L2P0CJ85 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L3P0CJ86 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L4P0CJ87 422 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L5P0CJ88 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L6P0CJ89 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L7P0CJ90 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 GABRB1P18505 474 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 VHLP40337 213 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
TGFB1-202ENST00000597453 FAM3AP98173 230 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4L9Q6RFH8 374 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ENTHD1Q8IYW4 607 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF555Q8NEP9 628 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 OR8B12Q8NGG6 310 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 OR2T27Q8NH04 317 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 SGK3Q96BR1 496 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 WDFY2Q96P53 400 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
TGFB1-202ENST00000597453 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 TRIM36Q9NQ86 728 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 FAM206AQ9NX38 181 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 DUX4Q9UBX2 424 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF391Q9UJN7 358 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 IKZF2Q9UKS7 526 aa12.54□□□□□ -0.4
TGFB1-202ENST00000597453 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-202ENST00000597453 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 ANKRD30BLA7E2S9 258 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 POM121CA8CG34 1229 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 P2RY10O00398 339 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 DVL1O14640 695 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 NDUFA2O43678 99 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 TOX4O94842 621 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 MELTFP08582 738 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 ATP6V1E1P36543 226 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 DDOSTP39656 456 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 CSNK2BP67870 215 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 SLC34A1Q06495 639 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 ZNF829Q3KNS6 432 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-202ENST00000597453 OGFRL1Q5TC84 451 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-202ENST00000597453 TEX36Q5VZQ5 186 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 Q6YL49 198 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 OR8S1Q8NH09 359 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 SIRPDQ9H106 197 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 C14orf119Q9NWQ9 140 aa12.53□□□□□ -0.4
TGFB1-202ENST00000597453 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
TGFB1-202ENST00000597453 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 A0A1W2PQL4 384 aaPredicted RBP12.52□□□□□ -0.41
TGFB1-202ENST00000597453 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.41
TGFB1-202ENST00000597453 APOL3O95236 402 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 LIPFP07098 398 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 BPIFB3P59826 476 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 ACTC1P68032 377 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 ACTA1P68133 377 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 RELBQ01201 579 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 MZT1Q08AG7 82 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 GFOD2Q3B7J2 385 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 FIP1L1Q6UN15 594 aaKnown RBP12.52□□□□□ -0.41
TGFB1-202ENST00000597453 BTN2A1Q7KYR7 527 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 PNLDC1Q8NA58 520 aaKnown RBP12.52□□□□□ -0.41
TGFB1-202ENST00000597453 OR10H4Q8NGA5 316 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 RHOXF1Q8NHV9 184 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 LRRC29Q8WV35 223 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 SEH1LQ96EE3 360 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 TBX5Q99593 518 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 APOL4Q9BPW4 351 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 SLITRK2Q9H156 845 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 MOB1AQ9H8S9 216 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 NOX4Q9NPH5 578 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 KAAG1Q9UBP8 84 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 MRM2Q9UI43 246 aaKnown RBP12.52□□□□□ -0.41
TGFB1-202ENST00000597453 WNK1Q9H4A3 2382 aa12.52□□□□□ -0.41
TGFB1-202ENST00000597453 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 J3QRE1 110 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 SRSF10O75494 262 aaKnown RBP12.51□□□□□ -0.41
TGFB1-202ENST00000597453 GSK3AP49840 483 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 ARF6P62330 175 aa12.51□□□□□ -0.41
TGFB1-202ENST00000597453 SRSF4Q08170 494 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms