RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 SNTG1Q9NSN8 517 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 TVP23BQ9NYZ1 205 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 LRP12Q9Y561 859 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SRRM5B3KS81 715 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 H0YAE9 185 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 TMPRSS2O15393 492 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 WIPF1O43516 503 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 LYNP07948 512 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 MELTFP08582 738 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 H2BFMP0C1H6 154 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 MYF6P23409 242 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 HSD11B1P28845 292 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 DDOSTP39656 456 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SLC15A1P46059 708 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 BLVRAP53004 296 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 CRISP1P54107 249 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
LIG1-213ENST00000596672 PRDX4Q13162 271 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PTGES3Q15185 160 aaKnown RBP8.63□□□□□ -1.03
LIG1-213ENST00000596672 AADACL4Q5VUY2 407 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 TTC23Q5W5X9 447 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 STUMQ69YW2 141 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 BTNL3Q6UXE8 466 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PLEKHG7Q6ZR37 379 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 RHOUQ7L0Q8 258 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SHFQ7M4L6 423 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SSX6Q7RTT6 188 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PDZD9Q8IXQ8 264 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PNKDQ8N490 385 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 SCCPDHQ8NBX0 429 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 TNFRSF14Q92956 283 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
LIG1-213ENST00000596672 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 RDH12Q96NR8 316 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 WDFY2Q96P53 400 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 ANKRD60Q9BZ19 345 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 CHIAQ9BZP6 476 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 PAPOLBQ9NRJ5 636 aaKnown RBP8.63□□□□□ -1.03
LIG1-213ENST00000596672 TNFRSF19Q9NS68 423 aa8.63□□□□□ -1.03
LIG1-213ENST00000596672 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 A0A0U1RQK1 487 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 A0A1B0GTI1 187 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 LOC100130705A0A1B0GUX0 176 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 hCG_1807616A0A1W2PRN6 198 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ANKRD30BLA7E2S9 258 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 PRODHO43272 600 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 AKR7A2O43488 359 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ENSAO43768 121 aaKnown RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 CST4P01036 141 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 HMGN1P05114 100 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 DGUOKQ16854 277 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ATPAF1Q5TC12 328 aaPredicted RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 HCP5Q6MZN7 132 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 Q6YL49 198 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 OR52H1Q8NGJ2 320 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 OR8S1Q8NH09 359 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 PIGCQ92535 297 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ZNF488Q96MN9 340 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 GAFA1Q96PS6 74 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 APOL4Q9BPW4 351 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 PAPOLGQ9BWT3 736 aaKnown RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 OR10A2Q9H208 303 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 OPA3Q9H6K4 179 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 UNKLQ9H9P5 680 aaKnown RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 ELL3Q9HB65 397 aaPredicted RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 ERVK-18Q9QC07 812 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 RPUSD1Q9UJJ7 312 aaKnown RBP8.62□□□□□ -1.03
LIG1-213ENST00000596672 ZNF222Q9UK12 451 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 MAB21L2Q9Y586 359 aa8.62□□□□□ -1.03
LIG1-213ENST00000596672 IGKV1D-17A0A075B6S4 117 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ZAR1LA6NP61 321 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 RNASEK-C17orf49H0YIS7 233 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 SLC16A6O15403 523 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 KCNAB3O43448 404 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 TOX4O94842 621 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 IGHV1-69P01742 117 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 TTRP02766 147 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 NPY4RP50391 375 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ROM1Q03395 351 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 KLRD1Q13241 179 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 SNAPC1Q16533 368 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 KIAA2026Q5HYC2 2103 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 SLC35D3Q5M8T2 416 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 C12orf73Q69YU5 71 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 C16orf87Q6PH81 154 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ZNF788Q6ZQV5 615 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ANGPTL6Q8NI99 470 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 OR51E1Q8TCB6 317 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 C17orf50Q8WW18 174 aa8.61□□□□□ -1.03
LIG1-213ENST00000596672 ST8SIA4Q92187 359 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms