RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TMEM80Q96HE8 168 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 TMEM246Q9BRR3 403 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 PLEKHA1Q9HB21 404 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 ABCB9Q9NP78 766 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 PCDHB10Q9UN67 800 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 PCDHGB5Q9Y5G0 923 aa11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-207ENST00000595631 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 TMEM210A6NLX4 147 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 LALBAP00709 142 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 PIPP12273 146 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 MYL12AP19105 171 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 MYF6P23409 242 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 C21orf33P30042 268 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 CCR9P51686 369 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 CEACAM21Q3KPI0 293 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 ZNF404Q494X3 552 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 CLVS2Q5SYC1 327 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 C6orf141Q5SZD1 244 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 FAM166AQ6J272 317 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 KLHL36Q8N4N3 616 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 SPICQ8N5J4 248 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 NPRL2Q8WTW4 380 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 ADAT3Q96EY9 351 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 HIST1H2AAQ96QV6 131 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 PDCD1LG2Q9BQ51 273 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 PLCXD1Q9NUJ7 323 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 FKBP14Q9NWM8 211 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 CAB39Q9Y376 341 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 EXOSC1Q9Y3B2 195 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 SIRT4Q9Y6E7 314 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 HIVEP2P31629 2446 aa11.54□□□□□ -0.56
SHKBP1-207ENST00000595631 EFCAB10A6NFE3 127 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ANKRD61A6NGH8 418 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 DHRS7CA6NNS2 312 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 B4DSR2 109 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 F5H0A9 414 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 SLC1A7O00341 560 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 PLPP2O43688 288 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 RHBDL1O75783 438 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ZFPL1O95159 310 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 LHBP01229 141 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ISG15P05161 165 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 MSMBP08118 114 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 VHLP40337 213 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 GBX2P52951 348 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 GNG3P63215 75 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 LCN2P80188 198 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 UBE2V2Q15819 145 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 TMEM244Q5VVB8 128 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 MUC20Q8N307 709 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ZNF676Q8N7Q3 588 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ZFP41Q8N8Y5 198 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 OR5A2Q8NGI9 324 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 GATAD2BQ8WXI9 593 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 ANKRD60Q9BZ19 345 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 OR51I2Q9H344 312 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 PAK1IP1Q9NWT1 392 aaPredicted RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 CNOT2Q9NZN8 540 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
SHKBP1-207ENST00000595631 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 OOEPA6NGQ2 149 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 LGALS8O00214 317 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 AKR7A2O43488 359 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 GYPAP02724 150 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 TFF1P04155 84 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 WNT2P09544 360 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 TGM4P49221 684 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 FAM76BQ5HYJ3 339 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 HAGHLQ6PII5 290 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 TMPRSS11AQ6ZMR5 421 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 STX19Q8N4C7 294 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 OR13C3Q8NGS6 347 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 OR51F2Q8NH61 342 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 OR5AK2Q8NH90 309 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 ITFG2Q969R8 447 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 TMEM186Q96B77 213 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 FGGYQ96C11 551 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 CHST5Q9GZS9 411 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 HIF1ANQ9NWT6 349 aa11.52□□□□□ -0.57
SHKBP1-207ENST00000595631 HHLA2Q9UM44 414 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms