RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MNDAP41218 407 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 RFX2P48378 723 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 GABRA6Q16445 453 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM244Q5VVB8 128 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 OTPQ5XKR4 325 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.65
SCAF1-202ENST00000595242 SYT9Q86SS6 491 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 LINC00346Q8IVM7 164 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 Q8N402 240 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 ZIC4Q8N9L1 334 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM106AQ96A25 262 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 OR52A1Q9UKL2 312 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 SLC22A13Q9Y226 551 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 TRAV8-7A0A075B6U6 113 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 PLA2G10O15496 165 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 CYTIPO60759 359 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 HKR1P10072 659 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 IGFBP3P17936 291 aaPredicted RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 MAGEB1P43366 347 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 SOX2P48431 317 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 PITPNBP48739 271 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 IDH3GP51553 393 aaPredicted RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 PSMA6P60900 246 aaKnown RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 C20orf196Q8IYI0 205 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 CADM3Q8N126 398 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 WDR31Q8NA23 367 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 OR51A4Q8NGJ6 313 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 LGALS14Q8TCE9 139 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 ORAI1Q96D31 301 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 NEURL2Q9BR09 285 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 WACQ9BTA9 647 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 SLC22A4Q9H015 551 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 ABCG5Q9H222 651 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 BRD7Q9NPI1 651 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 PNRC2Q9NPJ4 139 aaKnown RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 NUFIP1Q9UHK0 495 aaKnown RBP10.95□□□□□ -0.66
SCAF1-202ENST00000595242 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 HHLA2Q9UM44 414 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 FLVCR1Q9Y5Y0 555 aa10.95□□□□□ -0.66
SCAF1-202ENST00000595242 A0A0G2JMP0 313 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 A0A0X1KG70 313 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 B9A039 149 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 DHHO43323 396 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 GSTZ1O43708 216 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 ALX3O95076 343 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 CD2P06729 351 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 MSR1P21757 451 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 PPOXP50336 477 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 MMP15P51511 669 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 PITPNAQ00169 270 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 ASPHD2Q6ICH7 369 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 FAHD2BQ6P2I3 314 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 CFAP77Q6ZQR2 320 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 NRARPQ7Z6K4 114 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 ELMOD2Q8IZ81 293 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 ZDHHC22Q8N966 263 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 OR4M2Q8NGB6 313 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 TSEN15Q8WW01 171 aaKnown RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 RAB40AQ8WXH6 277 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 NABP1Q96AH0 204 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 TMEM45BQ96B21 275 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 FAHD2AQ96GK7 314 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 C11orf54Q9H0W9 315 aaPredicted RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 NELFAQ9H3P2 528 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 LPAR2Q9HBW0 351 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 EMC7Q9NPA0 242 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 CA10Q9NS85 328 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 DDX28Q9NUL7 540 aaKnown RBP10.94□□□□□ -0.66
SCAF1-202ENST00000595242 MALT1Q9UDY8 824 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 DHDHQ9UQ10 334 aa10.94□□□□□ -0.66
SCAF1-202ENST00000595242 RYR3Q15413 4870 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ARHGAP32A7KAX9 2087 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 IGKV3D-15A0A087WSY6 115 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 TMEM269A0A1B0GVZ9 245 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 LOC107986453A0A1B0GWG9 222 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ANXA2P2A6NMY6 339 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 TTRP02766 147 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ANXA2P07355 339 aaKnown RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ERCC1P07992 297 aaPredicted RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 MSMBP08118 114 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 FAM157BP0CG42 384 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 MAP2K3P46734 347 aa10.93□□□□□ -0.66
SCAF1-202ENST00000595242 FOXG1P55316 489 aaPredicted RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 MRPS34P82930 218 aaKnown RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 ENDOGQ14249 297 aaKnown RBP10.93□□□□□ -0.66
SCAF1-202ENST00000595242 PHYHD1Q5SRE7 291 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms