RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PIGCQ92535 297 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 MED30Q96HR3 178 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 RNF170Q96K19 258 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 SSX3Q99909 188 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 NIPSNAP1Q9BPW8 284 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 DGCR6LQ9BY27 220 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 ARL8BQ9NVJ2 186 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 TAS2R1Q9NYW7 299 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 NLKQ9UBE8 527 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 MAB21L2Q9Y586 359 aa13.33□□□□□ -0.28
LIG1-205ENST00000593425 IGKV1D-17A0A075B6S4 117 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 TCRBV5S2A0A599 114 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 MEGF11A6BM72 1044 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 OR2AT4A6NND4 320 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 PLXNB1O43157 2135 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 SNX3O60493 162 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 SELENOFO60613 162 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 GLRA1P23415 457 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 GABRA2P47869 451 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 MICAQ29983 383 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 SAMD5Q5TGI4 173 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 SHFQ7M4L6 423 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 ZNRF1Q8ND25 227 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 OR8B12Q8NGG6 310 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 OTULINQ96BN8 352 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 ZNF222Q9UK12 451 aa13.32□□□□□ -0.28
LIG1-205ENST00000593425 SAMHD1Q9Y3Z3 626 aaKnown RBP13.32□□□□□ -0.28
LIG1-205ENST00000593425 ANGPTL7O43827 346 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 PRB2P02812 416 aaPredicted RBP13.31□□□□□ -0.28
LIG1-205ENST00000593425 OPN1MWP04001 364 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OPN1MW2P0DN77 364 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OPN1MW3P0DN78 364 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 PSG2P11465 335 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 POU1F1P28069 291 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 KIR2DS4P43632 304 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 GPM6AP51674 278 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 BLMHQ13867 455 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OR2T5Q6IEZ7 315 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 CRIP3Q6Q6R5 217 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 C16orf89Q6UX73 402 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 FAM185AQ8N0U4 392 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 TMEM185AQ8NFB2 350 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OR51G2Q8NGK0 314 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OR2T29Q8NH02 315 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OTOSQ8NHW6 89 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 TEX47Q8TBZ9 253 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 CFHR4Q92496 578 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 OR51V1Q9H2C8 321 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 ABCB9Q9NP78 766 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 MED4Q9NPJ6 270 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 ACTR3BQ9P1U1 418 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
LIG1-205ENST00000593425 SF3B6Q9Y3B4 125 aaKnown RBP13.31□□□□□ -0.28
LIG1-205ENST00000593425 H0YAE9 185 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 LYNP07948 512 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 PSMA6P60900 246 aaKnown RBP13.3□□□□□ -0.28
LIG1-205ENST00000593425 LRRC75BQ2VPJ9 315 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 FBLN7Q53RD9 439 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 DMRTC1Q5HYR2 192 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 KPRPQ5T749 579 aaPredicted RBP13.3□□□□□ -0.28
LIG1-205ENST00000593425 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.3□□□□□ -0.28
LIG1-205ENST00000593425 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 KLHDC1Q8N7A1 406 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 OR10G2Q8NGC3 310 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 OR4C13Q8NGP0 309 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 THEM6Q8WUY1 208 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 MAGIXQ9H6Y5 334 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 REEP1Q9H902 201 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 C19orf12Q9NSK7 152 aa13.3□□□□□ -0.28
LIG1-205ENST00000593425 TRBV23-1A0A0A0MS06 115 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 CHST1O43916 411 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 SPATS1Q496A3 300 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 Q6ZPA2 131 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 OR5D13Q8NGL4 314 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 FAM234AQ9H0X4 552 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 OR51I2Q9H344 312 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
LIG1-205ENST00000593425 YY1AP1Q9H869 796 aa13.29□□□□□ -0.28
LIG1-205ENST00000593425 ZNF732B4DXR9 585 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 H3BN98 237 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 GNG3P63215 75 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 CD300LDQ6UXZ3 194 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 C11orf42Q8N5U0 333 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
LIG1-205ENST00000593425 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 SDSLQ96GA7 329 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 CLPTM1LQ96KA5 538 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 NDE1Q9NXR1 346 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 LRP12Q9Y561 859 aa13.28□□□□□ -0.28
LIG1-205ENST00000593425 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
LIG1-205ENST00000593425 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms