RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 CABLES2Q9BTV7 478 aa6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 GAL3ST2Q9H3Q3 398 aa6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 SMDT1Q9H4I9 107 aa6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 CNTD2Q9H8S5 307 aa6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 B9D1Q9UPM9 204 aa6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 PRRC2BQ5JSZ5 2229 aaKnown RBP6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 YLPM1P49750 1951 aaKnown RBP6.84□□□□□ -1.31
NEDD4L-229ENST00000590506 A0A1W2PRU2 124 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 FAM221AA4D161 298 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ZNF705FA8MVS1 300 aaPredicted RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 NSA2O95478 260 aaKnown RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 HLA-DQA2P01906 255 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 LCATP04180 440 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 IL6RP08887 468 aaPredicted RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ZNF705DP0CH99 300 aaPredicted RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ZNF705BP0CI00 300 aaPredicted RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ERGP11308 486 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 TUBG1P23258 451 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 PTGER4P35408 488 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 RBMXP38159 391 aaKnown RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 GPR1P46091 355 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 SLC37A1P57057 533 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 FOXF1Q12946 379 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 FZD2Q14332 565 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 EXOSC7Q15024 291 aaKnown RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 RNF151Q2KHN1 245 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ITPRIPL2Q3MIP1 535 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 WDR25Q64LD2 544 aaPredicted RBP6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ULK3Q6PHR2 472 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 DEGS2Q6QHC5 323 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 LINC00114Q6XXX2 140 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 SSX7Q7RTT5 188 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 DEFB132Q7Z7B7 95 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 MARCH3Q86UD3 253 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 ADIPOR2Q86V24 386 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 THRSPQ92748 146 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 TSLPQ969D9 159 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 TRIM2Q9C040 744 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 FKBP11Q9NYL4 201 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 FOXJ2Q9P0K8 574 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 VAX2Q9UIW0 290 aa6.84□□□□□ -1.32
NEDD4L-229ENST00000590506 TCRBV21S2A2A0A5A6 115 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 ITGB1BP1O14713 200 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 HPRT1P00492 218 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 WNT5AP41221 380 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 RND2P52198 227 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 VAMP2P63027 116 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 TPGS2Q68CL5 300 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 SLC25A26Q70HW3 274 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 COX15Q7KZN9 410 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 Q7L0L9 218 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 SLC16A14Q7RTX9 510 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 NOXO1Q8NFA2 376 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 CYB5D2Q8WUJ1 264 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 EXTL1Q92935 676 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 TMEM18Q96B42 140 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 LMLNQ96KR4 655 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 C5orf34Q96MH7 638 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 OR8B4Q96RC9 309 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 OR2J1Q9GZK6 312 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 PCBD2Q9H0N5 130 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 LRRK1Q38SD2 2015 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 DOCK8Q8NF50 2099 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 LNP1A1A4G5 178 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 PLRG1O43660 514 aaKnown RBP6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 GPR137BO60478 399 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 CEACAM8P31997 349 aaPredicted RBP6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 GPR3P46089 330 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 TNFSF10P50591 281 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 UCP3P55916 312 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 GABREP78334 506 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 HSF1Q00613 529 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 FAM53BQ14153 422 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 C1orf100Q5SVJ3 147 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 PLPP4Q5VZY2 271 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 CLEC2AQ6UVW9 174 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 ZNF66Q6ZN08 573 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 ZNF100Q8IYN0 542 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 SHISA5Q8N114 240 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 NECAP1Q8NC96 275 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 OR5H2Q8NGV7 314 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 OR2G3Q8NGZ4 309 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 STT3BQ8TCJ2 826 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 TMEM37Q8WXS4 190 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 DNASE2BQ8WZ79 361 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 SERINC1Q9NRX5 453 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 C1orf123Q9NWV4 160 aa6.83□□□□□ -1.32
NEDD4L-229ENST00000590506 A0A1W2PPQ1 181 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 MEGF11A6BM72 1044 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 A6NCN8 305 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 E5RGE8 158 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 CD55P08174 381 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 CDKN1BP46527 198 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 RAB7AP51149 207 aa6.82□□□□□ -1.32
NEDD4L-229ENST00000590506 NOVA1P51513 510 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms