RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZNF275Q9NSD4 429 aaPredicted RBP18.1■□□□□ 0.49
R3HDM4-206ENST00000590454 BLOC1S6Q9UL45 172 aa18.1■□□□□ 0.49
R3HDM4-206ENST00000590454 TMEM212A6NML5 194 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 WIPF1O43516 503 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 CSF3P09919 207 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 SRP9P49458 86 aaKnown RBP18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 TMEM42Q69YG0 159 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 FAM166AQ6J272 317 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 MOB3CQ70IA8 216 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 MOGAT3Q86VF5 341 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 ZDHHC23Q8IYP9 409 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 OR13C5Q8NGS8 318 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 OR5P3Q8WZ94 311 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 CCL17Q92583 94 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 UFSP2Q9NUQ7 469 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 ENPP5Q9UJA9 477 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 ANK2Q01484 3957 aa18.09■□□□□ 0.49
R3HDM4-206ENST00000590454 GRPP07492 148 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 HNF1AP20823 631 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 GABARAPL2P60520 117 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 MRPS11P82912 194 aaKnown RBP18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 RIN1Q13671 783 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 SPHARQ15513 63 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 FAM120AOSQ5T036 256 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 ZBTB37Q5TC79 503 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 IL17RELQ6ZVW7 336 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 OR8S1Q8NH09 359 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 HAVCR2Q8TDQ0 301 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 GHSRQ92847 366 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 FGGYQ96C11 551 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 SMIM19Q96E16 107 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 PGLYRP3Q96LB9 341 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 YTHDF1Q9BYJ9 559 aaKnown RBP18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 CHODLQ9H9P2 273 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 HHLA2Q9UM44 414 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 MPC1Q9Y5U8 109 aa18.08■□□□□ 0.48
R3HDM4-206ENST00000590454 DHRS7CA6NNS2 312 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 VWC2LB2RUY7 222 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 NRASP01111 189 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 TNFRSF1AP19438 455 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 MED22Q15528 200 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 CLVS2Q5SYC1 327 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 C11orf53Q8IXP5 236 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 FTMTQ8N4E7 242 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 OR13C3Q8NGS6 347 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 BPESC1Q9GZL8 116 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 COMMD4Q9H0A8 199 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 MYOZ1Q9NP98 299 aaPredicted RBP18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 PPP1R3CQ9UQK1 317 aa18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 NOP16Q9Y3C1 178 aaKnown RBP18.07■□□□□ 0.48
R3HDM4-206ENST00000590454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 WNT9BO14905 357 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 PTBP3O95758 552 aaKnown RBP18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 CELP19835 753 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 GIFP27352 417 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 GATA4P43694 442 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 GPM6AP51674 278 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 UBE2V2Q15819 145 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 HFEQ30201 348 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 PLCXD3Q63HM9 321 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF826PQ6ZT77 177 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 CELF2-AS1Q8N7Q2 184 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 RNF170Q96K19 258 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 PLEKHA1Q9HB21 404 aa18.06■□□□□ 0.48
R3HDM4-206ENST00000590454 ANXA2P2A6NMY6 339 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 C3orf80F5H4A9 247 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 CYB5R3P00387 301 aaPredicted RBP18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 NR4A2P43354 598 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 SOX2P48431 317 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 TAS2R43P59537 309 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 RPS11P62280 158 aaKnown RBP eCLIP18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 EMX1Q04741 257 aaPredicted RBP18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 ACSM1Q08AH1 577 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF154Q13106 437 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 CEACAM21Q3KPI0 293 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 AVPI1Q5T686 147 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 SPARTQ8N0X7 666 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 SPERTQ8NA61 448 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 CCDC54Q8NEL0 328 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 OR1M1Q8NGA1 313 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 NPRL2Q8WTW4 380 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 ITFG2Q969R8 447 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 MICU1Q9BPX6 476 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 PIMREGQ9BSJ6 248 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 ACOT13Q9NPJ3 140 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 TMEM106BQ9NUM4 274 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 C14orf119Q9NWQ9 140 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF281Q9Y2X9 895 aa18.05■□□□□ 0.48
R3HDM4-206ENST00000590454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.05■□□□□ 0.482e-8■■■□□ 18.5
R3HDM4-206ENST00000590454 IGKV1-9A0A0C4DH69 117 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 ANKRD61A6NGH8 418 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF732B4DXR9 585 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 PPIHO43447 177 aaKnown RBP18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 PLPP2O43688 288 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF205O95201 554 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 HSMCR30P0CW71 290 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 ZNF12P17014 697 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 TBCEQ15813 527 aaPredicted RBP18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 FAM201AQ5SY85 155 aa18.04■□□□□ 0.48
R3HDM4-206ENST00000590454 ASPHD2Q6ICH7 369 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms