RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PRAMEF6Q5VXH4 476 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 MUC20Q8N307 709 aaPredicted RBP8.72□□□□□ -1.01
SDF2-208ENST00000589788 OR8B12Q8NGG6 310 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 DVL3Q92997 716 aaPredicted RBP8.72□□□□□ -1.01
SDF2-208ENST00000589788 ERGIC1Q969X5 290 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 TMEM186Q96B77 213 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 MISP3Q96FF7 219 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 SIGLEC11Q96RL6 698 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 TBX5Q99593 518 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 PAPOLGQ9BWT3 736 aaKnown RBP8.72□□□□□ -1.01
SDF2-208ENST00000589788 DUSP21Q9H596 190 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 AMBNQ9NP70 447 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 PAK1IP1Q9NWT1 392 aaPredicted RBP8.72□□□□□ -1.01
SDF2-208ENST00000589788 HIF1ANQ9NWT6 349 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 ZNF319Q9P2F9 582 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 PSORS1C1Q9UIG5 152 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 GTF2A1LQ9UNN4 478 aa8.72□□□□□ -1.01
SDF2-208ENST00000589788 MAGEA13PA6NCF6 341 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 EFCAB10A6NFE3 127 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 A6NLC8 198 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 PRR32B1ATL7 298 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 LOC110117498-PIK3R3F6TDL0 507 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 APOL3O95236 402 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 IGHA1P01876 353 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 KRT8P05787 483 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 GRPP07492 148 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 OR2T7P0C7T2 308 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 SRD5A1P18405 259 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 RBMXP38159 391 aaKnown RBP8.71□□□□□ -1.02
SDF2-208ENST00000589788 ZMYND11Q15326 602 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 OR8B8Q15620 311 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 MPPED2Q15777 294 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 AHSA2Q719I0 299 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 LRRC28Q86X40 367 aaPredicted RBP8.71□□□□□ -1.02
SDF2-208ENST00000589788 RFLNBQ8N5W9 214 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 OR10H4Q8NGA5 316 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 OR2T27Q8NH04 317 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 Q8TCH9 128 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 GGHQ92820 318 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 MYDGFQ969H8 173 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 RNFT2Q96EX2 444 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 PBOV1Q9GZY1 135 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 CDIP1Q9H305 208 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 ABCB9Q9NP78 766 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 FAM206AQ9NX38 181 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 EXOGQ9Y2C4 368 aaKnown RBP8.71□□□□□ -1.02
SDF2-208ENST00000589788 VPS13CQ709C8 3753 aa8.71□□□□□ -1.02
SDF2-208ENST00000589788 JMJD1CQ15652 2540 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PPIAL4EA0A075B759 164 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 A0A0U1RQV5 110 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 A0A1W2PQL4 384 aaPredicted RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 hCG_1807616A0A1W2PRN6 198 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 ANXA2P2A6NMY6 339 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PTGES3LE9PB15 166 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PPIAL4DF5H284 164 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 RGS10O43665 173 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PLPP2O43688 288 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 MRPS14O60783 128 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 FADS2O95864 444 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 IFNA2P01563 188 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 RPSAP08865 295 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 FAM157CP0CG43 387 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PPIAL4FP0DN26 164 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 EEF1B2P24534 225 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 SRP14P37108 136 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 ST3GAL4Q11206 333 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 IKZF1Q13422 519 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 BCL2L15Q5TBC7 163 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 FAHD2BQ6P2I3 314 aaPredicted RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 YIPF7Q8N8F6 280 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 BOLLQ8N9W6 283 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 LGALS12Q96DT0 336 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 FAHD2AQ96GK7 314 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 LYZL4Q96KX0 146 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 MICU1Q9BPX6 476 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 JAM3Q9BX67 310 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 MOB1AQ9H8S9 216 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PATZ1Q9HBE1 687 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 RNF7Q9UBF6 113 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 NUFIP1Q9UHK0 495 aaKnown RBP8.7□□□□□ -1.02
SDF2-208ENST00000589788 RHBDD3Q9Y3P4 386 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PPIAL4AQ9Y536 164 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 PCDHGB1Q9Y5G3 927 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 MPC1Q9Y5U8 109 aa8.7□□□□□ -1.02
SDF2-208ENST00000589788 A0A0G2JMP0 313 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 A0A0X1KG70 313 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 ZNF850A8MQ14 1090 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 J3QRE1 110 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 MAGEB4O15481 346 aaPredicted RBP8.69□□□□□ -1.02
SDF2-208ENST00000589788 FOXH1O75593 365 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 RPP14O95059 124 aaKnown RBP8.69□□□□□ -1.02
SDF2-208ENST00000589788 PTBP3O95758 552 aaKnown RBP8.69□□□□□ -1.02
SDF2-208ENST00000589788 CST4P01036 141 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 CDK1P06493 297 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 HTR1AP08908 422 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 ATP6V1B1P15313 513 aa8.69□□□□□ -1.02
SDF2-208ENST00000589788 RPS2P15880 293 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms