RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PATZ1Q9HBE1 687 aaKnown RBP6.89□□□□□ -1.31
DNMT1-219ENST00000589349 DDX28Q9NUL7 540 aaKnown RBP6.89□□□□□ -1.31
DNMT1-219ENST00000589349 C1orf123Q9NWV4 160 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 TVP23BQ9NYZ1 205 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 MIOXQ9UGB7 285 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 GTF2A1LQ9UNN4 478 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 PPIAL4AQ9Y536 164 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
DNMT1-219ENST00000589349 AQP12BA6NM10 295 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 CEACAM18A8MTB9 384 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 TRIM77I1YAP6 450 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 MLNRO43193 412 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 VENTXO95231 258 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 GRK5P34947 590 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 NAA10P41227 235 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-219ENST00000589349 MAGEA2P43356 314 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 SLC25A1P53007 311 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 ELLP55199 621 aaPredicted RBP6.88□□□□□ -1.31
DNMT1-219ENST00000589349 SEC61A1P61619 476 aaKnown RBP6.88□□□□□ -1.31
DNMT1-219ENST00000589349 SNAPC1Q16533 368 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 TMEM155Q4W5P6 130 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 TMEM236Q5W0B7 351 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 SHFQ7M4L6 423 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 AQP12AQ8IXF9 295 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 HS3ST5Q8IZT8 346 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 OR56B2PQ8NGI1 322 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 FAM81AQ8TBF8 368 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 REEP6Q96HR9 211 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 RBM4Q9BWF3 364 aaKnown RBP6.88□□□□□ -1.31
DNMT1-219ENST00000589349 SLC22A4Q9H015 551 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 C1orf21Q9H246 121 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 MARCH7Q9H992 704 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 PNRC2Q9NPJ4 139 aaKnown RBP6.88□□□□□ -1.31
DNMT1-219ENST00000589349 G6PC2Q9NQR9 355 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 MMP26Q9NRE1 261 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 CLN8Q9UBY8 286 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 LAMP5Q9UJQ1 280 aa6.88□□□□□ -1.31
DNMT1-219ENST00000589349 ACOT8O14734 319 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 XRCC2O43543 280 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 SELENOFO60613 162 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 FKBP6O75344 327 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TIPRLO75663 272 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 GLCEO94923 617 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 APOC1P02654 83 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 MRPL3P09001 348 aaKnown RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ANXA8P13928 327 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 CD80P33681 288 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 PITPNBP48739 271 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 RASSF2P50749 326 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ZNF134P52741 427 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ZNF121P58317 390 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ZNF154Q13106 437 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 MPPED2Q15777 294 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 KCNJ8Q15842 424 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 RSPO1Q2MKA7 263 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 C1orf146Q5VVC0 180 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 C1QL2Q7Z5L3 287 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 KRT77Q7Z794 578 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TMEM179BQ7Z7N9 219 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 KLBQ86Z14 1044 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 CPOQ8IVL8 374 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TIGD4Q8IY51 512 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 C3orf56Q8N813 242 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 HIST1H2AAQ96QV6 131 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TMEM246Q9BRR3 403 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ABHD6Q9BV23 337 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 PAPOLGQ9BWT3 736 aaKnown RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TTTY10Q9BZA0 68 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TMEM165Q9HC07 324 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 PAPOLBQ9NRJ5 636 aaKnown RBP6.87□□□□□ -1.31
DNMT1-219ENST00000589349 CMC2Q9NRP2 79 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 TNFRSF19Q9NS68 423 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 ERVK-18Q9QC07 812 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 RNF7Q9UBF6 113 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 DNAJB9Q9UBS3 223 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 DYSFO75923 2080 aa6.87□□□□□ -1.31
DNMT1-219ENST00000589349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.86□□□□□ -1.312e-8■■■■■ 29.6
DNMT1-219ENST00000589349 IGHV3OR15-7A0A075B7D8 119 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 C5orf63A6NC05 138 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 ANXA2P2A6NMY6 339 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 TRAPPC2LH3BP13 241 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 PSMD9O00233 223 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 MGST3O14880 152 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 ADAM20O43506 726 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 GMDSO60547 372 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 CIB2O75838 187 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 NXPH3O95157 252 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 GYPAP02724 150 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 LYNP07948 512 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 WNT2P09544 360 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 HOXB6P17509 224 aaKnown RBP6.86□□□□□ -1.31
DNMT1-219ENST00000589349 CFL1P23528 166 aaKnown RBP6.86□□□□□ -1.31
DNMT1-219ENST00000589349 PMELP40967 661 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 HCCSP53701 268 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 UCP3P55916 312 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 ESRRGP62508 458 aa6.86□□□□□ -1.31
DNMT1-219ENST00000589349 BAMBIQ13145 260 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms