RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 TMEM230Q96A57 120 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 HAUS1Q96CS2 278 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 SNF8Q96H20 258 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 SERPINB11Q96P15 392 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 VGLL1Q99990 258 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 HDHD2Q9H0R4 259 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 DEFB127Q9H1M4 99 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 LHX5Q9H2C1 402 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 ZDHHC11Q9H8X9 412 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 PLGRKTQ9HBL7 147 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 SLC39A1Q9NY26 324 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 SCML1Q9UN30 329 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 URGCP-MRPS24S4R325 110 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 MYO9BQ13459 2157 aa4.82□□□□□ -1.64
TPM4-203ENST00000586193 COL1A2P08123 1366 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 MUC3AQ02505 3323 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 TET1Q8NFU7 2136 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 CHD9Q3L8U1 2897 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 COL4A4P53420 1690 aaPredicted RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 EPOPA6NHQ4 379 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SIGLEC16A6NMB1 481 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SMLR1H3BR10 107 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 GOLGA8RI6L899 631 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 LDOC1O95751 146 aaPredicted RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 TTC4O95801 387 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 C6orf47O95873 294 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 HPRT1P00492 218 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 IGHV3-23P01764 117 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 TNNC2P02585 160 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SMIM10L2AP0DMW4 78 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SMIM10L2BP0DMW5 78 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 KDELR1P24390 212 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 CD40LGP29965 261 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 RPL22P35268 128 aaKnown RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 HRH1P35367 487 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 FABP6P51161 128 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 DEFB103AP81534 67 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 INCA1Q0VD86 236 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SLAMF1Q13291 335 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 ARFRP1Q13795 201 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 GPNMBQ14956 572 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 CD300LGQ6UXG3 332 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SETD3Q86TU7 594 aaPredicted RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 UBA3Q8TBC4 463 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 GEMIN6Q8WXD5 167 aaKnown RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 ANKRD36BP1Q96IX9 119 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 ZNF514Q96K75 400 aaPredicted RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 ZNF75AQ96N20 296 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SIGLEC12Q96PQ1 595 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SMIM14Q96QK8 99 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 GPR21Q99679 349 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 SELENOSQ9BQE4 189 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 TIMM29Q9BSF4 260 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 GABARAPL3Q9BY60 117 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 FAM107BQ9H098 131 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 ZNF702PQ9H963 129 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 PARVAQ9NVD7 372 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 MARCH5Q9NX47 278 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 MTRF1LQ9UGC7 380 aaKnown RBP4.81□□□□□ -1.64
TPM4-203ENST00000586193 TSC2P49815 1807 aa4.81□□□□□ -1.64
TPM4-203ENST00000586193 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 TRAV8-7A0A075B6U6 113 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 A0A0A6YYD5 115 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 TRAV39A0A0B4J263 110 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 SEC14L6B5MCN3 397 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 PI15O43692 258 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 ZNF354AO60765 605 aaPredicted RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 C1QAP02745 245 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 HPNP05981 417 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 EIF4EP06730 217 aaKnown RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 OR8U9P0C7N5 309 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 GFAPP14136 432 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 FOLR2P14207 255 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 PGAM1P18669 254 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 RAB5AP20339 215 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 PSMB6P28072 239 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 MIPP30301 263 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 PRLHRP49683 370 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 FGF8P55075 233 aaPredicted RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 ZNF121P58317 390 aaPredicted RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 RPL31P62899 125 aaKnown RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 DYNLT1P63172 113 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 ZBTB6Q15916 424 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 GCSAMLQ5JQS6 135 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 CPTPQ5TA50 214 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 RNLSQ5VYX0 342 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 FAM183BPQ6ZVS7 135 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 OAFQ86UD1 273 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 RALGPS2Q86X27 583 aaPredicted RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 CDKL3Q8IVW4 592 aaPredicted RBP4.8□□□□□ -1.64
TPM4-203ENST00000586193 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 OR8U1Q8NH10 309 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 ACTL9Q8TC94 416 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 RXFP2Q8WXD0 754 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 DNASE2BQ8WZ79 361 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 FAM3DQ96BQ1 224 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 ZNF681Q96N22 645 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 COPS4Q9BT78 406 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 SLC25A22Q9H936 323 aa4.8□□□□□ -1.64
TPM4-203ENST00000586193 SH2D2AQ9NP31 389 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms