RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 FGF23Q9GZV9 251 aaPredicted RBP6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 NUAK2Q9H093 628 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 LIN7BQ9HAP6 207 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 ZFP57Q9NU63 452 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 POLR1DQ9Y2S0 133 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 LRP12Q9Y561 859 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 HILPDAQ9Y5L2 63 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 LYVE1Q9Y5Y7 322 aa6.03□□□□□ -1.44
SMARCE1-217ENST00000580654 MUC4Q99102 2169 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 OR2AT4A6NND4 320 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 C17orf98A8MV24 154 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 M0R135 149 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 BAG2O95816 211 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 CD14P08571 375 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 PGA5P0DJD9 388 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 PSG2P11465 335 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 PPIBP23284 216 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 MDH1P40925 334 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 GABRA2P47869 451 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 OR3A4PP47883 348 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC9A3P48764 834 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 TAS2R41P59536 307 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 RPL31P62899 125 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC34A1Q06495 639 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 KRR1Q13601 381 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 MPP2Q14168 576 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SEC23BQ15437 767 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 RFX4Q33E94 735 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 ZNF260Q3ZCT1 412 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SATL1Q86VE3 508 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 FUNDC1Q8IVP5 155 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 FAM156AQ8NDB6 213 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 OR4M1Q8NGD0 313 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 OR10Z1Q8NGY1 313 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 RPL3LQ92901 407 aaKnown RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SDSLQ96GA7 329 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 ZNF799Q96GE5 643 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 RHOVQ96L33 236 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 NOL4LQ96MY1 436 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 ZNF570Q96NI8 536 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 PITX2Q99697 317 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC25A33Q9BSK2 321 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 NMNAT1Q9HAN9 279 aaPredicted RBP6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 USE1Q9NZ43 259 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 NLKQ9UBE8 527 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 GRHPRQ9UBQ7 328 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 SNX5Q9Y5X3 404 aa6.02□□□□□ -1.45
SMARCE1-217ENST00000580654 HERC1Q15751 4861 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 XKRYO14609 159 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 CDC42EP2O14613 210 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 LDLRAD4O15165 306 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 TIPRLO75663 272 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 IGHV1-8P0DP01 117 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 ZNF823P16415 610 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 OTX1P32242 354 aaPredicted RBP6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 CDKN2AP42771 156 aaKnown RBP6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 TPTEP56180 551 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 OR12D2P58182 307 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 NFYCQ13952 458 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 WHAMMP3Q1A5X7 153 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 C9orf152Q5JTZ5 239 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 OAFQ86UD1 273 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 NRMQ8IXM6 262 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 C11orf65Q8NCR3 313 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 OR4Q3Q8NH05 313 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 SPSB4Q96A44 273 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 RBM14Q96PK6 669 aaKnown RBP6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 OR52B2Q96RD2 323 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 DCLRE1BQ9H816 532 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 SP140LQ9H930 580 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 LGALS13Q9UHV8 139 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 SH3GLB1Q9Y371 365 aa6.01□□□□□ -1.45
SMARCE1-217ENST00000580654 ANKRD30BLA7E2S9 258 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 EFCAB9A8MZ26 197 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 SOCS2O14508 198 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 BIRC5O15392 142 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 OR2F2O95006 317 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 SLC2A1P11166 492 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 PSKH1P11801 424 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 DCTDP32321 178 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 OR1E2P47887 323 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 CENPAP49450 140 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 FAM3AP98173 230 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 PRKCDQ05655 676 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 STX3Q13277 289 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 ANKDD1AQ495B1 522 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 KLHL12Q53G59 568 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 PGM2L1Q6PCE3 622 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 DLEU7Q6UYE1 221 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 TMPRSS11FQ6ZWK6 438 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 PATL1Q86TB9 770 aaKnown RBP6□□□□□ -1.45
SMARCE1-217ENST00000580654 IFT20Q8IY31 132 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 OR6V1Q8N148 313 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 RPP25LQ8N5L8 163 aaKnown RBP6□□□□□ -1.45
SMARCE1-217ENST00000580654 CD177Q8N6Q3 437 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 OR13D1Q8NGV5 346 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 OR2T27Q8NH04 317 aa6□□□□□ -1.45
SMARCE1-217ENST00000580654 POLR2J2Q9GZM3 115 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms