RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 PLEKHA1Q9HB21 404 aa13.68□□□□□ -0.22
RARA-209ENST00000579727 MRPS18AQ9NVS2 196 aaKnown RBP13.68□□□□□ -0.22
RARA-209ENST00000579727 FRRS1LQ9P0K9 344 aa13.68□□□□□ -0.22
RARA-209ENST00000579727 CUBNO60494 3623 aa13.68□□□□□ -0.22
RARA-209ENST00000579727 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 E9PI62 339 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 F5H0A9 414 aaPredicted RBP13.67□□□□□ -0.22
RARA-209ENST00000579727 PHF1O43189 567 aaPredicted RBP13.67□□□□□ -0.22
RARA-209ENST00000579727 XPNPEP2O43895 674 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 NRASP01111 189 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 LIMS3P0CW19 117 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 LIMS4P0CW20 117 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 ZFP36P26651 326 aaKnown RBP13.67□□□□□ -0.22
RARA-209ENST00000579727 ETV1P50549 477 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 NPRL2Q8WTW4 380 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 TFAP2CQ92754 450 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 SEH1LQ96EE3 360 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 SHARPINQ9H0F6 387 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 ABCB9Q9NP78 766 aa13.67□□□□□ -0.22
RARA-209ENST00000579727 FGF20Q9NP95 211 aaPredicted RBP13.67□□□□□ -0.22
RARA-209ENST00000579727 LGALS8O00214 317 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 UBCP0CG48 685 aaKnown RBP13.66□□□□□ -0.22
RARA-209ENST00000579727 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 CHRFAM7AQ494W8 412 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 CLVS2Q5SYC1 327 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 OR2G6Q5TZ20 316 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 KCTD20Q7Z5Y7 419 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 SCCPDHQ8NBX0 429 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 OR10AC1Q8NH08 325 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
RARA-209ENST00000579727 MRPL48Q96GC5 212 aaKnown RBP13.66□□□□□ -0.22
RARA-209ENST00000579727 BEX2Q9BXY8 128 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 TLNRD1Q9H1K6 362 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 INPP5EQ9NRR6 644 aa13.66□□□□□ -0.22
RARA-209ENST00000579727 OOEPA6NGQ2 149 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 TMEM210A6NLX4 147 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 AKR7A2O43488 359 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 RHBDL1O75783 438 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 ATP6V1G2O95670 118 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 GYPAP02724 150 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 GTF2A1P52655 376 aaPredicted RBP13.65□□□□□ -0.22
RARA-209ENST00000579727 ALKBH1Q13686 389 aaKnown RBP13.65□□□□□ -0.22
RARA-209ENST00000579727 ZBTB37Q5TC79 503 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 FAHD2BQ6P2I3 314 aaPredicted RBP13.65□□□□□ -0.22
RARA-209ENST00000579727 KRT74Q7RTS7 529 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 FAM90A1Q86YD7 464 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 BATF2Q8N1L9 274 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 ZNF676Q8N7Q3 588 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 BPIFB6Q8NFQ5 453 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 OR51A4Q8NGJ6 313 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 GGHQ92820 318 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
RARA-209ENST00000579727 FAHD2AQ96GK7 314 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 TMEM160Q9NX00 188 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 CTSZQ9UBR2 303 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
RARA-209ENST00000579727 TRAV20A0A0B4J274 112 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 A0A1B0GW55 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 ANKRD61A6NGH8 418 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 LHBP01229 141 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 TFF1P04155 84 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 WNT2P09544 360 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L2P0CJ85 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L3P0CJ86 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L4P0CJ87 422 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L5P0CJ88 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L6P0CJ89 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L7P0CJ90 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 GNG3P63215 75 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 ESCO2Q56NI9 601 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 TMEM42Q69YG0 159 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 FDX2Q6P4F2 183 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 HAGHLQ6PII5 290 aaPredicted RBP13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4L9Q6RFH8 374 aaPredicted RBP13.64□□□□□ -0.23
RARA-209ENST00000579727 IZUMO2Q6UXV1 221 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DCDC5Q6ZRR9 648 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 Q6ZSR3 168 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 AHSA2Q719I0 299 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 OR8B3Q8NGG8 313 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 OR5A2Q8NGI9 324 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 TMEM80Q96HE8 168 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 ZNF488Q96MN9 340 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 OR8B2Q96RD0 313 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 WDR13Q9H1Z4 485 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 OR51I2Q9H344 312 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 SNTG1Q9NSN8 517 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 ERVK-18Q9QC07 812 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DUX4Q9UBX2 424 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 MIOXQ9UGB7 285 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 CLEC2DQ9UHP7 191 aa13.64□□□□□ -0.23
RARA-209ENST00000579727 DIMT1Q9UNQ2 313 aaKnown RBP13.64□□□□□ -0.23
RARA-209ENST00000579727 TRAV38-1A0A0B4J264 116 aa13.63□□□□□ -0.23
RARA-209ENST00000579727 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
RARA-209ENST00000579727 OR5B21A6NL26 309 aa13.63□□□□□ -0.23
RARA-209ENST00000579727 OR4C45A6NMZ5 311 aa13.63□□□□□ -0.23
RARA-209ENST00000579727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.63□□□□□ -0.23
RARA-209ENST00000579727 ADAM20O43506 726 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms