RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 AASSQ9UDR5 926 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 MIOXQ9UGB7 285 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 EXOGQ9Y2C4 368 aaKnown RBP13.36□□□□□ -0.27
VAPA-204ENST00000577901 hCG_1807616A0A1W2PRN6 198 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 TMEM210A6NLX4 147 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 J3QRE1 110 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 DHRS3O75911 302 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 RNASE1P07998 156 aaKnown RBP13.35□□□□□ -0.27
VAPA-204ENST00000577901 DBTP11182 482 aaKnown RBP13.35□□□□□ -0.27
VAPA-204ENST00000577901 ZNF85Q03923 595 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ZBTB37Q5TC79 503 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 KRT74Q7RTS7 529 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ACBD7Q8N6N7 88 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 BOLLQ8N9W6 283 aaKnown RBP13.35□□□□□ -0.27
VAPA-204ENST00000577901 OR5P3Q8WZ94 311 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 SLC25A28Q96A46 364 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ITPKCQ96DU7 683 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 RNF170Q96K19 258 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 TMEM246Q9BRR3 403 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ADI1Q9BV57 179 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 PPP1R3EQ9H7J1 279 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 DCLRE1BQ9H816 532 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 RNPEPL1Q9HAU8 725 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 TRIM36Q9NQ86 728 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 ENPP5Q9UJA9 477 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 GNG8Q9UK08 70 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 PIGLQ9Y2B2 252 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 RPL36Q9Y3U8 105 aaKnown RBP13.35□□□□□ -0.27
VAPA-204ENST00000577901 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
VAPA-204ENST00000577901 POM121CA8CG34 1229 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 CEACAM18A8MTB9 384 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 A8MXK9 166 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
VAPA-204ENST00000577901 DLGAP1O14490 977 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 FADS2O95864 444 aaKnown RBP13.34□□□□□ -0.27
VAPA-204ENST00000577901 WNT2P09544 360 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
VAPA-204ENST00000577901 PEX2P28328 305 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 IL13RA1P78552 427 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 ZNF91Q05481 1191 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 TP53I3Q53FA7 332 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 FAM201AQ5SY85 155 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 ZNF826PQ6ZT77 177 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 KCTD8Q6ZWB6 473 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 NLRC3Q7RTR2 1065 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 CYGBQ8WWM9 190 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 RORBQ92753 470 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 LGALS12Q96DT0 336 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 MS4A7Q9GZW8 240 aaPredicted RBP13.34□□□□□ -0.27
VAPA-204ENST00000577901 OR5V1Q9UGF6 321 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 WNK2Q9Y3S1 2297 aa13.34□□□□□ -0.27
VAPA-204ENST00000577901 TRAV38-1A0A0B4J264 116 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 ERICH4A6NGS2 130 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 CLDN34H7C241 214 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 LGALS8O00214 317 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 P2RY10O00398 339 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 NDUFA2O43678 99 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 ACTA2P62736 377 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 ACTG2P63267 376 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 ELF3P78545 371 aaPredicted RBP13.33□□□□□ -0.28
VAPA-204ENST00000577901 RAB40BQ12829 278 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 PDLIM3Q53GG5 364 aaPredicted RBP13.33□□□□□ -0.28
VAPA-204ENST00000577901 KLHL22Q53GT1 634 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 SFRP4Q6FHJ7 346 aaPredicted RBP13.33□□□□□ -0.28
VAPA-204ENST00000577901 DCDC5Q6ZRR9 648 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 WDR86Q86TI4 376 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 C11orf53Q8IXP5 236 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 DHRSXQ8N5I4 330 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 CCDC54Q8NEL0 328 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 OR8B3Q8NGG8 313 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 NEIL1Q96FI4 390 aaPredicted RBP13.33□□□□□ -0.28
VAPA-204ENST00000577901 OR8B2Q96RD0 313 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 VCXQ9H320 206 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 AMBNQ9NP70 447 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 SLC22A13Q9Y226 551 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 LRCH1Q9Y2L9 728 aa13.33□□□□□ -0.28
VAPA-204ENST00000577901 A0A1B0GTI1 187 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 A0A1B0GVI7 797 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 OOEPA6NGQ2 149 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 DHRS7CA6NNS2 312 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 CDIPTO14735 213 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 CASQ2O14958 399 aaPredicted RBP13.32□□□□□ -0.28
VAPA-204ENST00000577901 NRASP01111 189 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 LHBP01229 141 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 FAHP16930 419 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 CD80P33681 288 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 ISL1P61371 349 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 GNB2P62879 340 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 GNG3P63215 75 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 DEFA6Q01524 100 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 PAX8Q06710 450 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms