RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 UNQ9165/PRO28630Q6UXU0 137 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 RTL4Q6ZR62 310 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SNX20Q7Z614 316 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SLC30A8Q8IWU4 369 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 ASCC1Q8N9N2 400 aaKnown RBP0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SPANXA2-OT1Q8N9U9 137 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 OR2M7Q8NG81 312 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 OR51A7Q8NH64 312 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 LILRB4Q8NHJ6 448 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 NDNFQ8TB73 568 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 CDS1Q92903 461 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 CPB2Q96IY4 423 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 NAPGQ99747 312 aaPredicted RBP0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SULT4A1Q9BR01 284 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 TMEM175Q9BSA9 504 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 MARVELD1Q9BSK0 173 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 MAP1LC3CQ9BXW4 147 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 BEX2Q9BXY8 128 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 MS4A8Q9BY19 250 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 TDRD3Q9H7E2 651 aaKnown RBP0.95□□□□□ -2.26
TOP2A-202ENST00000577541 ZC4H2Q9NQZ6 224 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 ZNF586Q9NXT0 402 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 TAS2R5Q9NYW4 299 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 DHCR7Q9UBM7 475 aaKnown RBP0.95□□□□□ -2.26
TOP2A-202ENST00000577541 CLEC2DQ9UHP7 191 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 NDRG2Q9UN36 371 aaKnown RBP0.95□□□□□ -2.26
TOP2A-202ENST00000577541 CBY1Q9Y3M2 126 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SHANK1Q9Y566 2161 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 SBNO1A3KN83 1393 aa0.95□□□□□ -2.26
TOP2A-202ENST00000577541 GPR179Q6PRD1 2367 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 LTBP4Q8N2S1 1624 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 IGHV6-1A0A0B4J1U7 121 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 IGHV2OR16-5A0A0B4J2B6 119 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 BTNL10A8MVZ5 291 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 J3QT63 122 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 DFFAO00273 331 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 MANBAO00462 879 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 CHST10O43529 356 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 LHBP01229 141 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 P0C880 135 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 STAG3L2P0CL84 134 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 C1GALT1C1LP0DN25 315 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 M6PRP20645 277 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 MSR1P21757 451 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 HTR2CP28335 458 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 TALDO1P37837 337 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 CLDN6P56747 220 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 RBX1P62877 108 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ULK3Q6PHR2 472 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 CD300LGQ6UXG3 332 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ANGPTL8Q6UXH0 198 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 SLC35D2Q76EJ3 337 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 NDUFAF7Q7L592 441 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ADM2Q7Z4H4 148 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 SETD3Q86TU7 594 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 MDP1Q86V88 176 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 PDCL2Q8N4E4 241 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ST20-AS1Q8NBB2 130 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 CYB561A3Q8NBI2 242 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 TMEM104Q8NE00 496 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 OR5T3Q8NGG3 340 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 OR10G6Q8NH81 332 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 OR1L1Q8NH94 360 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 DCAKDQ8WVC6 231 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 RTN4IP1Q8WWV3 396 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 TMEM234Q8WY98 164 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 RERGQ96A58 199 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 TMEM159Q96B96 161 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 CENPNQ96H22 339 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 RDH12Q96NR8 316 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 SPACA5Q96QH8 159 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 GPR21Q99679 349 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 KCNS3Q9BQ31 491 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 LZTS2Q9BRK4 669 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 UTP23Q9BRU9 249 aaKnown RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ZNF717Q9BY31 904 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 IL22Q9GZX6 179 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ZSCAN16Q9H4T2 348 aaPredicted RBP0.94□□□□□ -2.26
TOP2A-202ENST00000577541 HEBP1Q9NRV9 189 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 TREX1Q9NSU2 369 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 POFUT2Q9Y2G5 429 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 LRRC42Q9Y546 428 aa0.94□□□□□ -2.26
TOP2A-202ENST00000577541 ELP1O95163 1332 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 TRAV6A0A075B6T7 132 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 TRAV8-7A0A075B6U6 113 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 IGHV3-49A0A0A0MS15 119 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 CEACAM18A8MTB9 384 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 H0YC42 278 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 H7C0C1 242 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 RFXANKO14593 260 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 POLR1CO15160 346 aaPredicted RBP0.93□□□□□ -2.26
TOP2A-202ENST00000577541 PSPHP1O15172 72 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 HSBP1O75506 76 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 CBR3O75828 277 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 PLEKHA8P1O95397 391 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 ETHE1O95571 254 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 CYB5R3P00387 301 aaPredicted RBP0.93□□□□□ -2.26
TOP2A-202ENST00000577541 GCGP01275 180 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 RPN2P04844 631 aa0.93□□□□□ -2.26
TOP2A-202ENST00000577541 RHOCP08134 193 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms