RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 MPZL1O95297 269 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 EPPINO95925 133 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 TCN2P20062 427 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF117Q03924 483 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 KISS1Q15726 138 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 JMJD6Q6NYC1 403 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAM174AQ8TBP5 190 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZPLD1Q8TCW7 415 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 OBP2AQ9NY56 170 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 TRPM6Q9BX84 2022 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 LRP5LA4QPB2 252 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 ANGPTL7O43827 346 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CDC14BO60729 498 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 ONECUT2O95948 504 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAM219AQ8IW50 185 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 PP6455Q8WZ26 134 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 MEGF10Q96KG7 1140 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CA14Q9ULX7 337 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CXCL10P02778 98 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CISD3P0C7P0 127 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CD200P41217 278 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 HLA-DRB3P79483 266 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 ST3GAL6Q9Y274 331 aa11.71□□□□□ -0.53
PCDHGB3-201ENST00000576222 CACNA1IQ9P0X4 2223 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 PQLC2LA1A4F0 135 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 IAPPP10997 89 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 CDAP32320 146 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 UCK1Q9HA47 277 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF320A2RRD8 509 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 NRASP01111 189 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 THBS4P35443 961 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR3A4PP47883 348 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 SHBQ15464 509 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF813Q6ZN06 617 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 V9GYS6 101 aa11.71□□□□□ -0.54
PCDHGB3-201ENST00000576222 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 YIF1AO95070 293 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ABHD16AO95870 558 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 MPGP29372 298 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 RNF4P78317 190 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 PTRH2Q9Y3E5 179 aaKnown RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF816-ZNF321PA0A0X1KG74 233 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 G3V3Q6 166 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 G3V3Y1 287 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 TCAPO15273 167 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 SOCS1O15524 211 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 PLRG1O43660 514 aaKnown RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 OTX2P32243 289 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 MICBQ29980 383 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR2B11Q5JQS5 317 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 NSUN5P2Q63ZY6 315 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 UNQ9370/PRO34162Q6UXP9 181 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF574Q6ZN55 896 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF321PQ8N8H1 164 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 PIPOXQ9P0Z9 390 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 KLK13Q9UKR3 277 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 KLHDC2Q9Y2U9 406 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 A0A1B0GX78 115 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 RAB4AP20338 218 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 BTCP35070 178 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF90Q03938 601 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 LHFPL2Q6ZUX7 228 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 C6orf201Q7Z4U5 140 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 OXGR1Q96P68 337 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 SERGEFQ9UGK8 458 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
PCDHGB3-201ENST00000576222 A0A0G2JK05 382 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 MLF1P58340 268 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 ATG4DQ86TL0 474 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 FAM58AQ8N1B3 248 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 LHX9Q9NQ69 397 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 XKRY2A2RUG3 117 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 ACAA2P42765 397 aaKnown RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 B2MP61769 119 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 RNF151Q2KHN1 245 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 CATSPERDQ86XM0 798 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 DMBX1Q8NFW5 382 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 PACRGQ96M98 296 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 VAMP5O95183 116 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms