RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 ZNF322Q6U7Q0 402 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-214ENST00000574003 PNKDQ8N490 385 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 TMEM163Q8TC26 289 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 ZNF488Q96MN9 340 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 GAFA1Q96PS6 74 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 CIB1Q99828 191 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 MROQ9BYG7 248 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 GABARAPL1Q9H0R8 117 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 SIRT7Q9NRC8 400 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 ONECUT1Q9UBC0 465 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
RPAIN-214ENST00000574003 MRM2Q9UI43 246 aaKnown RBP9.34□□□□□ -0.91
RPAIN-214ENST00000574003 RPUSD1Q9UJJ7 312 aaKnown RBP9.34□□□□□ -0.91
RPAIN-214ENST00000574003 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 P2RY10O00398 339 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 RPP14O95059 124 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 IGLV3-1P01715 115 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 TTRP02766 147 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 MUC1P15941 1255 aaPredicted RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 MDKP21741 143 aaPredicted RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 MAP2K3P46734 347 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 GABRA2P47869 451 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 TGM4P49221 684 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 RIDAP52758 137 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 ROM1Q03395 351 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 SRSF4Q08170 494 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 METTL11BQ5VVY1 283 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 PLCXD3Q63HM9 321 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 ZDHHC13Q8IUH4 622 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 ZNF679Q8IYX0 411 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 PNLDC1Q8NA58 520 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 OR51G2Q8NGK0 314 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 H1FXQ92522 213 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 UBE2FQ969M7 185 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 SLC25A28Q96A46 364 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 RAB3IPQ96QF0 476 aaPredicted RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 CHIAQ9BZP6 476 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 OR51I2Q9H344 312 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 RIBC2Q9H4K1 309 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 CNTD2Q9H8S5 307 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 UNKLQ9H9P5 680 aaKnown RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 TRIM36Q9NQ86 728 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 GPR173Q9NS66 373 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 H2AFY2Q9P0M6 372 aaPredicted RBP9.33□□□□□ -0.92
RPAIN-214ENST00000574003 OAZ3Q9UMX2 235 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 SLC22A13Q9Y226 551 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 PIGLQ9Y2B2 252 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 CMYA5Q8N3K9 4069 aa9.33□□□□□ -0.92
RPAIN-214ENST00000574003 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 A0A0U1RQK1 487 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 A0A0U1RQV5 110 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 TMEM210A6NLX4 147 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 LOC110117498-PIK3R3F6TDL0 507 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 CLDN34H7C241 214 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 NDUFB3O43676 98 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 SYNGR1O43759 233 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 LIPFP07098 398 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 MELTFP08582 738 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 GLRA1P23415 457 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 CEBPDP49716 269 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 FAM76BQ5HYJ3 339 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 NXNL2Q5VZ03 156 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 C16orf87Q6PH81 154 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 KCTD18Q6PI47 426 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 HAGHLQ6PII5 290 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 DEGS2Q6QHC5 323 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 FIP1L1Q6UN15 594 aaKnown RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 Q6YL49 198 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 SLC36A1Q7Z2H8 476 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 THAP5Q7Z6K1 395 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 FTMTQ8N4E7 242 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 PIP4P2Q8N4L2 257 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 Q8N7P7 452 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 OR10Z1Q8NGY1 313 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 ANGPTL6Q8NI99 470 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 PYDC1Q8WXC3 89 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 ASB17Q8WXJ9 295 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 DUS3LQ96G46 650 aaKnown RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 HIST1H2AAQ96QV6 131 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 DCTN5Q9BTE1 182 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 ZNF747Q9BV97 191 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 NLKQ9UBE8 527 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 NUFIP1Q9UHK0 495 aaKnown RBP9.32□□□□□ -0.92
RPAIN-214ENST00000574003 OR52A1Q9UKL2 312 aa9.32□□□□□ -0.92
RPAIN-214ENST00000574003 IGKV1D-17A0A075B6S4 117 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 A0A1B0GTI1 187 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 ACOD1A6NK06 481 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 ZNF254O75437 659 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 PSG2P11465 335 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 NDUFB7P17568 137 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 RASSF2P50749 326 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 GNG3P63215 75 aa9.31□□□□□ -0.92
RPAIN-214ENST00000574003 RELBQ01201 579 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms