RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ZNF260Q3ZCT1 412 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 MTFR2Q6P444 385 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 CRIP3Q6Q6R5 217 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 ASCL4Q6XD76 172 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 ZSCAN4Q8NAM6 433 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 CHST4Q8NCG5 386 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 GCDHQ92947 438 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 SNRNP40Q96DI7 357 aaKnown RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 POM121Q96HA1 1249 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 GAL3ST1Q99999 423 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 USB1Q9BQ65 265 aaKnown RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 PAPOLGQ9BWT3 736 aaKnown RBP16.77■□□□□ 0.28
RPAIN-210ENST00000571613 CACNG6Q9BXT2 260 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 ACTR6Q9GZN1 396 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 HRASLSQ9HDD0 168 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 MPC1Q9Y5U8 109 aa16.77■□□□□ 0.28
RPAIN-210ENST00000571613 LOC400499M0QZD8 3231 aa16.77■□□□□ 0.27
RPAIN-210ENST00000571613 MEIOCA2RUB1 952 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 ANKRD30BLA7E2S9 258 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 CD300LBA8K4G0 201 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 CSTBP04080 98 aaKnown RBP16.76■□□□□ 0.27
RPAIN-210ENST00000571613 CPT2P23786 658 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 IL32P24001 234 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 RAG2P55895 527 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 RPS27AP62979 156 aaKnown RBP16.76■□□□□ 0.27
RPAIN-210ENST00000571613 PCGF3Q3KNV8 242 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 AGAP6Q5VW22 663 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 FBXW12Q6X9E4 464 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 Q6ZTK2 550 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 RNF144BQ7Z419 303 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 DOLPP1Q86YN1 238 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 ZDHHC23Q8IYP9 409 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 FAM89BQ8N5H3 189 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 OR5D18Q8NGL1 313 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 SEH1LQ96EE3 360 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 MRPS24Q96EL2 167 aaKnown RBP16.76■□□□□ 0.27
RPAIN-210ENST00000571613 WBP1Q96G27 269 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 TM2D1Q9BX74 207 aa16.76■□□□□ 0.27
RPAIN-210ENST00000571613 ZNF850A8MQ14 1090 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 MGMTP16455 207 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 SELEP16581 610 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 BTCP35070 178 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 RSU1Q15404 277 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 PNLIPRP3Q17RR3 467 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 CEACAM21Q3KPI0 293 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 MOGAT2Q3SYC2 334 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 CDNFQ49AH0 187 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 NAXEQ8NCW5 288 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 TMEM104Q8NE00 496 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 OR5A2Q8NGI9 324 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 ELL3Q9HB65 397 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-210ENST00000571613 IL36GQ9NZH8 169 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 ZNF629Q9UEG4 869 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-210ENST00000571613 NOP16Q9Y3C1 178 aaKnown RBP16.75■□□□□ 0.27
RPAIN-210ENST00000571613 PTPRQQ9UMZ3 2332 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 INMT-MINDY4F8WBC2 141 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 SMPD2O60906 423 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 DHFRP00374 187 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 PTHLHP12272 177 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 PSMB1P20618 241 aaKnown RBP16.75■□□□□ 0.27
RPAIN-210ENST00000571613 TAS2R19P59542 299 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 PRDX4Q13162 271 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 C3orf36Q3SXR2 165 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 TIMM23BQ5SRD1 257 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 RFPL4BQ6ZWI9 263 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 TMEM229BQ8NBD8 167 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 OR51T1Q8NGJ9 327 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 RAB3CQ96E17 227 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 NEURL2Q9BR09 285 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 SVILO95425 2214 aa16.75■□□□□ 0.27
RPAIN-210ENST00000571613 IGLV1-44P01699 117 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 TCRBP04435 133 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 HNRNPCP07910 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPAIN-210ENST00000571613 AKAIN1P0CW23 69 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 TRAPPC2P0DI81 140 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 TRAPPC2BP0DI82 140 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 GTF2F2P13984 249 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 SERPINA2P20848 420 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 GIFP27352 417 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 RCVRNP35243 200 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 RAD52P43351 418 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 UCP2P55851 309 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 PPP1CBP62140 327 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 KLRB1Q12918 225 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 PDZK1IP1Q13113 114 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 HLXQ14774 488 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-210ENST00000571613 C1QL2Q7Z5L3 287 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 SELENOIQ9C0D9 397 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 BANF2Q9H503 90 aa16.74■□□□□ 0.27
RPAIN-210ENST00000571613 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPAIN-210ENST00000571613 A0A1W2PR80 420 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 CYB5AP00167 134 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 MT-ND4P03905 459 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 SFTPCP11686 197 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 RAC2P15153 192 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 HIST1H1DP16402 221 aaKnown RBP16.73■□□□□ 0.27
RPAIN-210ENST00000571613 TSC22D1Q15714 1073 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 ZNF474Q6S9Z5 364 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-210ENST00000571613 BTN2A1Q7KYR7 527 aa16.73■□□□□ 0.27
RPAIN-210ENST00000571613 SAXO1Q8IYX7 474 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms