RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 STEAP2Q8NFT2 490 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 OR13C8Q8NGS7 320 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 LILRB4Q8NHJ6 448 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 DVL3Q92997 716 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF775Q96BV0 537 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RAB3CQ96E17 227 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 FAHD2AQ96GK7 314 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TECTBQ96PL2 329 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 FANCD2OSQ96PS1 177 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 FOXB1Q99853 325 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SLC6A7Q99884 636 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ARPC5LQ9BPX5 153 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SEC22CQ9BRL7 303 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 C1QTNF5Q9BXJ0 243 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TTTY12Q9BZ98 90 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PRDM14Q9GZV8 571 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CHST6Q9GZX3 395 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CST11Q9H112 138 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 WNT5BQ9H1J7 359 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 HEXA-AS1Q9H8Q6 139 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PLA2G3Q9NZ20 509 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 KLK13Q9UKR3 277 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 MGAT4AQ9UM21 535 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PIGLQ9Y2B2 252 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 KCNK7Q9Y2U2 307 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 HSPB11Q9Y547 144 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 EML6Q6ZMW3 1958 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CACNA1HO95180 2353 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SDK2Q58EX2 2172 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OTOGLQ3ZCN5 2332 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF891A8MT65 544 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 VSTM5A8MXK1 200 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PRSS44E7EML9 344 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 MFNGO00587 321 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SOCS1O15524 211 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 FARS2O95363 451 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 LCATP04180 440 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 AMY2AP04746 511 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 RLN1P04808 185 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 DBHP09172 617 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 CEACAM1P13688 526 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF24P17028 368 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 C4BPBP20851 252 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ECI1P42126 302 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OR3A4PP47883 348 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SLC6A9P48067 706 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 NOVA1P51513 510 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 FUT6P51993 359 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PER3P56645 1201 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 UBE2MP61081 183 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 CXADRP78310 365 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ARF1P84077 181 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 FAM3AP98173 230 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 GK2Q14410 553 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OR8B8Q15620 311 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SNAI3Q3KNW1 292 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 RNASE10Q5GAN6 216 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ATPAF1Q5TC12 328 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 TSPO2Q5TGU0 170 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF774Q6NX45 483 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 FAAP20Q6NZ36 180 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM53Q6P2H8 277 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 IGFL2Q6UWQ7 119 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 LINC00696Q6ZRV3 163 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 C1QL2Q7Z5L3 287 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 TRAPPC6BQ86SZ2 158 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 COMMD2Q86X83 199 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 HOGA1Q86XE5 327 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF101Q8IZC7 436 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SLC7A5P1Q8MH63 180 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PNLDC1Q8NA58 520 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ZSCAN4Q8NAM6 433 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ACBD4Q8NC06 268 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PXT1Q8NFP0 134 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OR2AK2Q8NG84 335 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OR2T35Q8NGX2 323 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 OR8S1Q8NH09 359 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 TERB2Q8NHR7 220 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 FGFBP3Q8TAT2 258 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ST8SIA4Q92187 359 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PIGTQ969N2 578 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 CMBLQ96DG6 245 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 MRPS24Q96EL2 167 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 CPNE2Q96FN4 548 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 REEP6Q96HR9 211 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 CCDC140Q96MF4 163 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SCGB3A2Q96PL1 93 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 NKX3-1Q99801 234 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 GAL3ST1Q99999 423 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM59Q9BXS4 323 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 BEX1Q9HBH7 125 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 PCDHB16Q9NRJ7 776 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 SLC7A10Q9NS82 523 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms