RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SLC16A9Q7RTY1 509 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 CYP4Z1Q86W10 505 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 COMMD1Q8N668 190 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 OR5M8Q8NGP6 311 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 OR2T27Q8NH04 317 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 ISOC1Q96CN7 298 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 TPD52L3Q96J77 140 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 TSSK2Q96PF2 358 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 P2RX4Q99571 388 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 MYLK2Q9H1R3 596 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 RGCCQ9H4X1 137 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 SIGLEC7Q9Y286 467 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 SIRT4Q9Y6E7 314 aaPredicted RBP6.92□□□□□ -1.3
SMG1-216ENST00000569122 DNAH7Q8WXX0 4024 aa6.92□□□□□ -1.3
SMG1-216ENST00000569122 C17orf98A8MV24 154 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ODF3BA8MYP8 253 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 DCTN6O00399 190 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ARPC3O15145 178 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 TBX1O43435 398 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 IDH3BO43837 385 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 KDELR2P33947 212 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ENTPD1P49961 510 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 IDH3AP50213 366 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 GZMMP51124 257 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 PRKXP51817 358 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 GRB2P62993 217 aaKnown RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 SLC35B1P78383 322 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 SEC23BQ15437 767 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ABCA11PQ4W5N1 156 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 LRRC23Q53EV4 343 aaPredicted RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 FGD3Q5JSP0 725 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 SMARCD3Q6STE5 483 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ETV3LQ6ZN32 361 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 OR2W3Q7Z3T1 314 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 THAP5Q7Z6K1 395 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ZDHHC21Q8IVQ6 265 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 TIGD4Q8IY51 512 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 DYNAPQ8N1N2 210 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 C11orf42Q8N5U0 333 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 OR8J3Q8NGG0 315 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 CHPT1Q8WUD6 406 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 RPL3LQ92901 407 aaKnown RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 ITFG2Q969R8 447 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 REEP6Q96HR9 211 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 RNF170Q96K19 258 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ERMAPQ96PL5 475 aaPredicted RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 PRR25Q96S07 402 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 LYSTQ99698 3801 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 OR10A2Q9H208 303 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 ELL3Q9HB65 397 aaPredicted RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 RPRD1BQ9NQG5 326 aaKnown RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 C19orf12Q9NSK7 152 aa6.91□□□□□ -1.3
SMG1-216ENST00000569122 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 ZNF256Q9Y2P7 627 aaPredicted RBP6.91□□□□□ -1.3
SMG1-216ENST00000569122 IGKV1D-17A0A075B6S4 117 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 TMEM120BA0PK00 339 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 ZNF878C9JN71 531 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 OR2F2O95006 317 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 NPPAP01160 153 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 ANXA2P07355 339 aaKnown RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 ZNF728P0DKX0 622 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 IGHV1-8P0DP01 117 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 SLC6A6P31641 620 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 YAP1P46937 504 aaKnown RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 GSK3AP49840 483 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 INSL3P51460 131 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 SMIM21Q3B7S5 101 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 TNFAIP8L3Q5GJ75 292 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 NANOGP8Q6NSW7 305 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 TBPL2Q6SJ96 375 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 ZNF782Q6ZMW2 699 aaPredicted RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 FAM86B1Q8N7N1 296 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 OR5P3Q8WZ94 311 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 RSRC1Q96IZ7 334 aaKnown RBP6.9□□□□□ -1.3
SMG1-216ENST00000569122 C7orf26Q96N11 449 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 NMNAT3Q96T66 252 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 TMEM120AQ9BXJ8 343 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 YY1AP1Q9H869 796 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 CENPMQ9NSP4 180 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 RHCGQ9UBD6 479 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 CD300AQ9UGN4 299 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 ZNF222Q9UK12 451 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 RHBDD3Q9Y3P4 386 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 HILPDAQ9Y5L2 63 aa6.9□□□□□ -1.3
SMG1-216ENST00000569122 hCG_38984A0A1B0GV85 526 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 A0A1W2PRQ8 180 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 UNC119BA6NIH7 251 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 CCL24O00175 119 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 MTRF1O75570 445 aaKnown RBP6.89□□□□□ -1.31
SMG1-216ENST00000569122 CST4P01036 141 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 SLC2A1P11166 492 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 CCL3L1P16619 93 aa6.89□□□□□ -1.31
SMG1-216ENST00000569122 HTR1DP28221 377 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms