RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ZNF850A8MQ14 1090 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-215ENST00000568477 PRKYO43930 277 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 PLATP00750 562 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 CST4P01036 141 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 LIPFP07098 398 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 ATP6V1B1P15313 513 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-215ENST00000568477 PRTN3P24158 256 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 ACKR3P25106 362 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 EPHA2P29317 976 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 BAMBIQ13145 260 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 PRDX4Q13162 271 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 MICBQ29980 383 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 WDR82Q6UXN9 313 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 ASB17Q8WXJ9 295 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 LYZL4Q96KX0 146 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-215ENST00000568477 CNN2Q99439 309 aaKnown RBP11.99□□□□□ -0.49
CMTM3-215ENST00000568477 MROQ9BYG7 248 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 TLNRD1Q9H1K6 362 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 SMURF1Q9HCE7 757 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 A0A0U1RQV5 110 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 TMEM269A0A1B0GVZ9 245 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 TMEM210A6NLX4 147 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZAR1LA6NP61 321 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 M0R129 80 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 PSMD9O00233 223 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 CDIPTO14735 213 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 MPZL2O60487 215 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 MRPS14O60783 128 aaKnown RBP11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF254O75437 659 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 CFPP27918 469 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 CFHR2P36980 270 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ALDH3B2P48448 385 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ROM1Q03395 351 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 POU4F2Q12837 409 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF829Q3KNS6 432 aaPredicted RBP11.98□□□□□ -0.49
CMTM3-215ENST00000568477 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 SLX4IPQ5VYV7 408 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 LAIR2Q6ISS4 152 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF773Q6PK81 442 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
CMTM3-215ENST00000568477 COMMD2Q86X83 199 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZDHHC23Q8IYP9 409 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 TCEANCQ8N8B7 351 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 PNLDC1Q8NA58 520 aaKnown RBP11.98□□□□□ -0.49
CMTM3-215ENST00000568477 OR5P3Q8WZ94 311 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 PIGCQ92535 297 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ITFG2Q969R8 447 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 HIST1H2AAQ96QV6 131 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 OR8B4Q96RC9 309 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 PCGF1Q9BSM1 259 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 FAM206AQ9NX38 181 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 H2AFY2Q9P0M6 372 aaPredicted RBP11.98□□□□□ -0.49
CMTM3-215ENST00000568477 KAAG1Q9UBP8 84 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 IKZF2Q9UKS7 526 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 COPS3Q9UNS2 423 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 TPRKBQ9Y3C4 175 aa11.98□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF816-ZNF321PA0A0X1KG74 233 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 SLC22A31A6NKX4 558 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 SRRM5B3KS81 715 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF879B4DU55 563 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 SLC1A7O00341 560 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 P2RY10O00398 339 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 DVL1O14640 695 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 ECDO95905 644 aaPredicted RBP11.97□□□□□ -0.49
CMTM3-215ENST00000568477 DCTDP32321 178 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 MAP2K3P46734 347 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 RIDAP52758 137 aaKnown RBP11.97□□□□□ -0.49
CMTM3-215ENST00000568477 CDC42P60953 191 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 WDR38Q5JTN6 314 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 NXNL2Q5VZ03 156 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 C12orf73Q69YU5 71 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF679Q8IYX0 411 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 TMEM163Q8TC26 289 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 ST8SIA4Q92187 359 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 RPL3LQ92901 407 aaKnown RBP11.97□□□□□ -0.49
CMTM3-215ENST00000568477 C12orf43Q96C57 262 aaKnown RBP11.97□□□□□ -0.49
CMTM3-215ENST00000568477 RNF170Q96K19 258 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 MNTQ99583 582 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 TTTY10Q9BZA0 68 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 PBOV1Q9GZY1 135 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 SCN3BQ9NY72 215 aa11.97□□□□□ -0.49
CMTM3-215ENST00000568477 PRR32B1ATL7 298 aa11.96□□□□□ -0.49
CMTM3-215ENST00000568477 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.96□□□□□ -0.49
CMTM3-215ENST00000568477 CLDN34H7C241 214 aa11.96□□□□□ -0.49
CMTM3-215ENST00000568477 TOX4O94842 621 aa11.96□□□□□ -0.49
CMTM3-215ENST00000568477 EEF1B2P24534 225 aaKnown RBP11.96□□□□□ -0.49
CMTM3-215ENST00000568477 BPIFB3P59826 476 aa11.96□□□□□ -0.49
CMTM3-215ENST00000568477 AADACL4Q5VUY2 407 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms