RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 PPIAL4AQ9Y536 164 aa8.2□□□□□ -1.1
CLK3-220ENST00000567992 A0A1B0GVI7 797 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 A6NIN4 97 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 A6NLC8 198 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 A8MXK9 166 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 H3BSH0 61 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 J3QLW9 94 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 LGALS8O00214 317 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 CDIPTO14735 213 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 SYT7O43581 403 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 PLPP2O43688 288 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 MTRF1O75570 445 aaKnown RBP8.19□□□□□ -1.1
CLK3-220ENST00000567992 FCN3O75636 299 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 ISG15P05161 165 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 UBCP0CG48 685 aaKnown RBP8.19□□□□□ -1.1
CLK3-220ENST00000567992 IRF2P14316 349 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 ZNF19P17023 458 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 ETV1P50549 477 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 GPM6AP51674 278 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 CCR9P51686 369 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 DOC2BQ14184 412 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 CR1LQ2VPA4 569 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 CEACAM21Q3KPI0 293 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 FAM120AOSQ5T036 256 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 TEX36Q5VZQ5 186 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 LYPD2Q6UXB3 125 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 IL17RELQ6ZVW7 336 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 THAP5Q7Z6K1 395 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 EGFL6Q8IUX8 553 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 KLHL36Q8N4N3 616 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 SCCPDHQ8NBX0 429 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 OR10AC1Q8NH08 325 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 LRRC29Q8WV35 223 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 GGHQ92820 318 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 RPL3LQ92901 407 aaKnown RBP8.19□□□□□ -1.1
CLK3-220ENST00000567992 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 RNF170Q96K19 258 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 VCXQ9H320 206 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 OR51I2Q9H344 312 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 GPR173Q9NS66 373 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 FKBP14Q9NWM8 211 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 HIF1ANQ9NWT6 349 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 CTSZQ9UBR2 303 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 LRCH1Q9Y2L9 728 aa8.19□□□□□ -1.1
CLK3-220ENST00000567992 FBN1P35555 2871 aaKnown RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 TRAV20A0A0B4J274 112 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 hCG_1807616A0A1W2PRN6 198 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 ANKRD61A6NGH8 418 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OOEPA6NGQ2 149 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OR5B21A6NL26 309 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 SRRM5B3KS81 715 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 ZNF732B4DXR9 585 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 XPNPEP2O43895 674 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 RHBDL1O75783 438 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 NRASP01111 189 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 HTR1AP08908 422 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 WNT2P09544 360 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PIPP12273 146 aaPredicted RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 RPS2P15880 293 aaKnown RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 DCKP27707 260 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 CFHR2P36980 270 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 GNG3P63215 75 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PAX2Q02962 417 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 ALKBH1Q13686 389 aaKnown RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 CLVS2Q5SYC1 327 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OR2G6Q5TZ20 316 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PLCXD3Q63HM9 321 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 SFRP4Q6FHJ7 346 aaPredicted RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 XAF1Q6GPH4 301 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 ZNF841Q6ZN19 808 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 DCDC5Q6ZRR9 648 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 MOB3CQ70IA8 216 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 GLCCI1Q86VQ1 547 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PRIMA1Q86XR5 153 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 ZNF485Q8NCK3 441 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 CCDC54Q8NEL0 328 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OR5A2Q8NGI9 324 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OR51A4Q8NGJ6 313 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 OR10Z1Q8NGY1 313 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 RPS4Y2Q8TD47 263 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 RGP1Q92546 391 aaPredicted RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 SEH1LQ96EE3 360 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 CHST5Q9GZS9 411 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PLCXD1Q9NUJ7 323 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 CLEC2DQ9UHP7 191 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 PSORS1C1Q9UIG5 152 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
CLK3-220ENST00000567992 ATRQ13535 2644 aa8.18□□□□□ -1.1
CLK3-220ENST00000567992 WNK2Q9Y3S1 2297 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 IGHV3OR15-7A0A075B7D8 119 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 A0A1B0GW55 424 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 PQLC2LA1A4F0 135 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 IRGMA1A4Y4 181 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 A6NHS1 94 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
CLK3-220ENST00000567992 PHF1O43189 567 aaPredicted RBP8.17□□□□□ -1.1
CLK3-220ENST00000567992 ZFPL1O95159 310 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms