RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CLVS2Q5SYC1 327 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 TMEM244Q5VVB8 128 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 WDR82Q6UXN9 313 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 PEG10Q86TG7 708 aaKnown RBP14.45□□□□□ -0.1
COMMD4-220ENST00000567720 STX19Q8N4C7 294 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 C19orf18Q8NEA5 215 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 OR11L1Q8NGX0 322 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 C1orf159Q96HA4 380 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF184Q99676 751 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-220ENST00000567720 PDCD1LG2Q9BQ51 273 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF665Q9H7R5 613 aa14.45□□□□□ -0.1
COMMD4-220ENST00000567720 hCG_1807616A0A1W2PRN6 198 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 NRASP01111 189 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CDK1P06493 297 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CCDC159P0C7I6 412 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 IRF2P14316 349 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 MDH2P40926 338 aaKnown RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CDH15P55291 814 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 SLC35A2P78381 396 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CEACAM21Q3KPI0 293 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 TMEM155Q4W5P6 130 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 TMPRSS11AQ6ZMR5 421 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 KCTD8Q6ZWB6 473 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 MOB3CQ70IA8 216 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 C1orf87Q8N0U7 546 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 GCSAMQ8N6F7 178 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF676Q8N7Q3 588 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CCDC54Q8NEL0 328 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 HAVCR2Q8TDQ0 301 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 RGP1Q92546 391 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 RPL3LQ92901 407 aaKnown RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 ADAT3Q96EY9 351 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 RNF170Q96K19 258 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 CHST5Q9GZS9 411 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 METTL17Q9H7H0 456 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 UBAP1Q9NZ09 502 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 RNF7Q9UBF6 113 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 SIRT4Q9Y6E7 314 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-220ENST00000567720 WNK2Q9Y3S1 2297 aa14.44□□□□□ -0.1
COMMD4-220ENST00000567720 ANKRD61A6NGH8 418 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 OR5B21A6NL26 309 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 TMEM212A6NML5 194 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 GNG3P63215 75 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 MED21Q13503 144 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF404Q494X3 552 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 FAM76BQ5HYJ3 339 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 LRRC28Q86X40 367 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-220ENST00000567720 LRRC29Q8WV35 223 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 GATAD2BQ8WXI9 593 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 HHLA2Q9UM44 414 aa14.43□□□□□ -0.1
COMMD4-220ENST00000567720 PPIAL4EA0A075B759 164 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 TRBV2A0A0J9YWF9 115 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 CEACAM18A8MTB9 384 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF732B4DXR9 585 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 F5H0A9 414 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 PPIAL4DF5H284 164 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 C3orf80F5H4A9 247 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 CDIPTO14735 213 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 MYL12BO14950 172 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 PPIAL4FP0DN26 164 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 ZNF12P17014 697 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 UBE2V2Q15819 145 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 CCDC58Q4VC31 144 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 CYB5R2Q6BCY4 276 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 RPL22L1Q6P5R6 122 aaKnown RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 MUC20Q8N307 709 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 SPICQ8N5J4 248 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 ZFP41Q8N8Y5 198 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 BOLLQ8N9W6 283 aaKnown RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 SCCPDHQ8NBX0 429 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 OR5A2Q8NGI9 324 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 OR13C3Q8NGS6 347 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 OR5AK2Q8NH90 309 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 NPRL2Q8WTW4 380 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 C10orf35Q96D05 121 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 RAB39BQ96DA2 213 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 SMIM19Q96E16 107 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 HIST1H2AAQ96QV6 131 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 COMMD4Q9H0A8 199 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 OR51I2Q9H344 312 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 TMEM165Q9HC07 324 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 TRIM36Q9NQ86 728 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 CHCHD3Q9NX63 227 aaKnown RBP14.42□□□□□ -0.1
COMMD4-220ENST00000567720 ERVK-18Q9QC07 812 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 PPIAL4AQ9Y536 164 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 NAV3Q8IVL0 2385 aa14.42□□□□□ -0.1
COMMD4-220ENST00000567720 PQLC2LA1A4F0 135 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 SRRM5B3KS81 715 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 PTGES3LE9PB15 166 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 FSTL3O95633 263 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 LHBP01229 141 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 CRHBPP24387 322 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 WNT4P56705 351 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 SEC61A1P61619 476 aaKnown RBP14.41□□□□□ -0.1
COMMD4-220ENST00000567720 TRMT10AQ8TBZ6 339 aaKnown RBP14.41□□□□□ -0.1
COMMD4-220ENST00000567720 TMEM246Q9BRR3 403 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 DUSP21Q9H596 190 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 LPAR2Q9HBW0 351 aa14.41□□□□□ -0.1
COMMD4-220ENST00000567720 BABAM2Q9NXR7 383 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms