RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 FAM71F1Q96KD3 344 aaPredicted RBP14.73□□□□□ -0.05
CMTM3-213ENST00000566756 RASL10BQ96S79 203 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 GPER1Q99527 375 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 TM2D1Q9BX74 207 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 DEFB126Q9BYW3 111 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 DNAJB11Q9UBS4 358 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 OSGIN2Q9Y236 505 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 V9GYS6 101 aa14.73□□□□□ -0.05
CMTM3-213ENST00000566756 IGKV1-9A0A0C4DH69 117 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 SERPINE3A8MV23 424 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 ZNF814B7Z6K7 855 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 CRTAPO75718 401 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-213ENST00000566756 RAD51DO75771 328 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 JMJD7P0C870 316 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 PET100P0DJ07 73 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 COX6A1P12074 109 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 SGCAQ16586 387 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 ATRAIDQ6UW56 229 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 C6orf15Q6UXA7 325 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-213ENST00000566756 CLEC18BQ6UXF7 455 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 TMPPEQ6ZT21 453 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 FAM57BQ71RH2 274 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 RNF144BQ7Z419 303 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 GTPBP8Q8N3Z3 284 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-213ENST00000566756 WDSUB1Q8N9V3 476 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 CLRN3Q8NCR9 226 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 ARHGAP5-AS1Q96IT6 56 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 AQP10Q96PS8 301 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 SPACA5Q96QH8 159 aa14.72□□□□□ -0.05
CMTM3-213ENST00000566756 NKX6-2Q9C056 277 aaPredicted RBP14.72□□□□□ -0.05
CMTM3-213ENST00000566756 OTOGLQ3ZCN5 2332 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 CCDC187A0A096LP49 1063 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 C13orf42A0A1B0GVH6 325 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 ATG12O94817 140 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 MT-CO3P00414 261 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 APOC1P02654 83 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 AMY2BP19961 511 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 MSR1P21757 451 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 PTGFRP43088 359 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 HIST1H3AP68431 136 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 H3F3AP84243 136 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 ARFRP1Q13795 201 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 ZNF169Q14929 603 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-213ENST00000566756 HIST2H3PS2Q5TEC6 136 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 HIST2H3AQ71DI3 136 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 ARMC10Q8N2F6 343 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 GJC3Q8NFK1 279 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 OR1S2Q8NGQ3 325 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 EMG1Q92979 244 aaKnown RBP14.71□□□□□ -0.05
CMTM3-213ENST00000566756 TMEM54Q969K7 222 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 RTBDNQ9BSG5 229 aaPredicted RBP14.71□□□□□ -0.05
CMTM3-213ENST00000566756 SOX7Q9BT81 388 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 NELFAQ9H3P2 528 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 BANF2Q9H503 90 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 KNTC1P50748 2209 aa14.71□□□□□ -0.05
CMTM3-213ENST00000566756 TMEM218A2RU14 115 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 VAMP5O95183 116 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 SLC2A1P11166 492 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 OR3A2P47893 321 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 SUPT4H1P63272 117 aaKnown RBP14.71□□□□□ -0.06
CMTM3-213ENST00000566756 KISS1Q15726 138 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 TMEM176BQ3YBM2 270 aaPredicted RBP14.71□□□□□ -0.06
CMTM3-213ENST00000566756 CARD17Q5XLA6 110 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 RTN4RL2Q86UN3 420 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 ARL11Q969Q4 196 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 PGAM5Q96HS1 289 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 C2orf50Q96LR7 162 aa14.71□□□□□ -0.06
CMTM3-213ENST00000566756 CHCHD2Q9Y6H1 151 aaPredicted RBP14.71□□□□□ -0.06
CMTM3-213ENST00000566756 SDK2Q58EX2 2172 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 ATP6V1G2-DDX39BF2Z307 99 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 DHRS3O75911 302 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 TSPAN9O75954 239 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 OTX1P32242 354 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-213ENST00000566756 NPY4RP50391 375 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 EIF5AP63241 154 aaKnown RBP14.7□□□□□ -0.06
CMTM3-213ENST00000566756 DEFA5Q01523 94 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 IL15RAQ13261 267 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 PABPC1L2AQ5JQF8 200 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 C10orf91Q5T1B1 145 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 PDSS1Q5T2R2 415 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 AADACL3Q5VUY0 350 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 TIPARPQ7Z3E1 657 aaKnown RBP14.7□□□□□ -0.06
CMTM3-213ENST00000566756 ZSCAN4Q8NAM6 433 aaPredicted RBP14.7□□□□□ -0.06
CMTM3-213ENST00000566756 OR13G1Q8NGZ3 307 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 ZNF416Q9BWM5 594 aa14.7□□□□□ -0.06
CMTM3-213ENST00000566756 H0YIZ8 118 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 RRP8O43159 456 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 EIF1BO60739 113 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 H2AFB1P0C5Y9 115 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 CSNK1A1P48729 337 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 ZNF84P51523 738 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 AIMP2Q13155 320 aaKnown RBP14.69□□□□□ -0.06
CMTM3-213ENST00000566756 GFOD2Q3B7J2 385 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 CRIP3Q6Q6R5 217 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 UNQ6126/PRO20091Q6UXV3 157 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 PIP4P1Q86T03 277 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 SVBPQ8N300 66 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 OR51T1Q8NGJ9 327 aa14.69□□□□□ -0.06
CMTM3-213ENST00000566756 INTS12Q96CB8 462 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms