RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TRGV5A0A0B4J1U4 118 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TRAV34A0A0B4J273 112 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TRAV40A0A0B4J280 105 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 A0A0J9YW62 118 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GOLGA8QA0A0J9YX86 632 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 A0A1B0GUH1 482 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 EXOC1LA0A1B0GW35 172 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GNG14A0A1W2PPG7 69 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GOLGA8OA6NCC3 632 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C5orf51A6NDU8 294 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DPRXA6NFQ7 191 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OOEPA6NGQ2 149 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 A8MT66 165 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 EEF1E1-BLOC1S5C9J1V9 151 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GOLGA8NF8WBI6 632 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 LYNX1G3V0Z9 82 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 H0YIV9 168 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 AP3B1O00203 1094 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 UPK1AO00322 258 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FOXE1O00358 373 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 TXNDC9O14530 226 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 EEF1E1O43324 174 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 FADS1O60427 444 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 KLHL41O60662 606 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PLIN3O60664 434 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 RAMP1O60894 148 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 KERAO60938 352 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SMIM24O75264 130 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CDH16O75309 829 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TRIM3O75382 744 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 CTAG2O75638 210 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 UTS2O95399 124 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CPSF4O95639 269 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 EPPINO95925 133 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 P04436 131 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SNRPAP09012 282 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 RBP1P09455 135 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SLC35G6P0C7Q6 338 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 GKN3PP0CG01 181 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 LYNX1P0DP58 116 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 BCKDHAP12694 445 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CD99P14209 185 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ZNF24P17028 368 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CSNK2A2P19784 350 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 TCN1P20061 433 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 IMPDH1P20839 514 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 BGNP21810 368 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DRD5P21918 477 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DPP4P27487 766 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PTPN6P29350 595 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 IL12AP29459 219 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ATP5DP30049 168 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DEKP35659 375 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 CDKN2CP42773 168 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 MAGEA12P43365 314 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 HNMTP50135 292 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CDK9P50750 372 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 NCBP2P52298 156 aaKnown RBP eCLIP0.89□□□□□ -2.27
SMG1-212ENST00000566328 RAP1GDS1P52306 607 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SMSP52788 366 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 AP1S2P56377 157 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CLDN18P56856 261 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 HSD17B7P56937 341 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CARD18P57730 90 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ATP6V0D1P61421 351 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 STXBP1P61764 594 aaKnown RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 VSNL1P62760 191 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 KCNJ2P63252 427 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TNFRSF17Q02223 184 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 RELAQ04206 551 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 BNIP2Q12982 314 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 IFT88Q13099 833 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ART3Q13508 389 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PON3Q15166 354 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CHI3L2Q15782 390 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 FAM83EQ2M2I3 478 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 DEFB116Q30KQ4 102 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 KRTAP13-4Q3LI77 160 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ADPRMQ3LIE5 342 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TMEM176BQ3YBM2 270 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 ATP6AP1LQ52LC2 224 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ZNF311Q5JNZ3 666 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CFAP157Q5JU67 520 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 PAGE3Q5JUK9 113 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 ZNF678Q5SXM1 525 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C9orf135Q5VTT2 229 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 IL23RQ5VWK5 629 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TIGD3Q6B0B8 471 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 HIST2H2AA3Q6FI13 130 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 OR4F3Q6IEY1 312 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 NOXRED1Q6NXP6 359 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C8orf74Q6P047 294 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 SLC48A1Q6P1K1 146 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 TRIM40Q6P9F5 258 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 XKRXQ6PP77 449 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CBLN3Q6UW01 205 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 Q6ZPB1 254 aaPredicted RBP0.89□□□□□ -2.27
SMG1-212ENST00000566328 RTL4Q6ZR62 310 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 CYS1Q717R9 158 aa0.89□□□□□ -2.27
SMG1-212ENST00000566328 C6orf120Q7Z4R8 191 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms