RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ALKBH6Q3KRA9 238 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 IDNKQ5T6J7 187 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 DDI2Q5TDH0 399 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 PLCXD3Q63HM9 321 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 MOB3CQ70IA8 216 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-205ENST00000564899 ZDHHC23Q8IYP9 409 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 JAGN1Q8N5M9 183 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 OR52N4Q8NGI2 321 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 SYNPRQ8TBG9 265 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 NPRL2Q8WTW4 380 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 FAM222BQ8WU58 562 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 AP3S1Q92572 193 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 PIK3IP1Q96FE7 263 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 TECTBQ96PL2 329 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 SLIRPQ9GZT3 109 aaKnown RBP9.48□□□□□ -0.89
SF3B3-205ENST00000564899 NEK6Q9HC98 313 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 CA10Q9NS85 328 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 MRPL15Q9P015 296 aaKnown RBP9.48□□□□□ -0.89
SF3B3-205ENST00000564899 DAPK2Q9UIK4 370 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 GPR160Q9UJ42 338 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 CMAHPQ9Y471 501 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 PMF1-BGLAPU3KQ54 211 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 NBEAL1Q6ZS30 2694 aa9.48□□□□□ -0.89
SF3B3-205ENST00000564899 IFITM5A6NNB3 132 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 KIAA1324LA8MWY0 1029 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 DEFB108AA8MXU0 73 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SHISA9B4DS77 424 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SIAH2O43255 324 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 LILRA1O75019 489 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 ALX3O95076 343 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SLC2A2P11168 524 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 ZNF250P15622 560 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 PRKACBP22694 351 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 KLF3P57682 345 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SELENOVP59797 346 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 PRDX4Q13162 271 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 ZNF404Q494X3 552 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 DMRTC1Q5HYR2 192 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 TMEM255AQ5JRV8 349 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 HES5Q5TA89 166 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 KRT74Q7RTS7 529 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 MCFD2Q8NI22 146 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 TRMT10AQ8TBZ6 339 aaKnown RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 FOXRED1Q96CU9 486 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 FOXC2Q99958 501 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SYT3Q9BQG1 590 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 METTL17Q9H7H0 456 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 PPP1R3EQ9H7J1 279 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 ZNF442Q9H7R0 627 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 PLGRKTQ9HBL7 147 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 CGGBP1Q9UFW8 167 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-205ENST00000564899 DUSP13Q9UII6 198 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 SLC7A11Q9UPY5 501 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 MPC1Q9Y5U8 109 aa9.47□□□□□ -0.89
SF3B3-205ENST00000564899 CUBNO60494 3623 aa9.46□□□□□ -0.89
SF3B3-205ENST00000564899 A0A075B6Q4 140 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 FAM230AA0A1W2PPH8 454 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 FAM221AA4D161 298 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 VSTM5A8MXK1 200 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 AIPO00170 330 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 IGHV3-13P01766 116 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 ALDOBP05062 364 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 CA6P23280 308 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 LOXP28300 417 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 ZNF93P35789 620 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 RAB11BQ15907 218 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 LRP11Q86VZ4 500 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 OR8G5Q8NG78 346 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 OR6M1Q8NGM8 313 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 ZNF671Q8TAW3 534 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 DVL3Q92997 716 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 BORCS8Q96FH0 119 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 CPNE2Q96FN4 548 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 HIST1H2AAQ96QV6 131 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 GPER1Q99527 375 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 NKX3-1Q99801 234 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 ADAT1Q9BUB4 502 aaKnown RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 MRPL37Q9BZE1 423 aaKnown RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 C6orf62Q9GZU0 229 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-205ENST00000564899 SMURF1Q9HCE7 757 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 ABCB9Q9NP78 766 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 PLEKHA6Q9Y2H5 1048 aa9.46□□□□□ -0.9
SF3B3-205ENST00000564899 IGLV3-9A0A075B6K5 115 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 A0A0B4J203 849 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 E7EQL1 145 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 SLC17A2O00624 439 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 TMEM127O75204 238 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 CLPXO76031 633 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 OR4A8P0C604 315 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 CD37P11049 281 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 CFPP27918 469 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 THBS2P35442 1172 aa9.45□□□□□ -0.9
SF3B3-205ENST00000564899 FUT6P51993 359 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms