RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 FAM27D1Q5T7N8 215 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 TMEM268Q5VZI3 342 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 HTR3DQ70Z44 454 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 ARIH2OSQ8N7S6 290 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 ACOT4Q8N9L9 421 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 IL21Q9HBE4 155 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 PLAC1Q9HBJ0 212 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 IL36AQ9UHA7 158 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 RPL34P49207 117 aaKnown RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 RPS24P62847 133 aaKnown RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 RELTQ969Z4 430 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 EID2BQ96D98 161 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 LIN7CQ9NUP9 197 aaKnown RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 VDAC3Q9Y277 283 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 HLA-DQA1P01909 254 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 GJA4P35212 333 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 LIM2P55344 173 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 TP53INP2Q8IXH6 220 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 SLC6A18Q96N87 628 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 SIGLEC11Q96RL6 698 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 BOCQ9BWV1 1114 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 WDR61Q9GZS3 305 aaKnown RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 ZMAT3Q9HA38 289 aaKnown RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 GJD2Q9UKL4 321 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 LRP5O75197 1615 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 SIPA1L3O60292 1781 aaPredicted RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 TRAV30A0A087WSZ9 112 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 NPIPB8E9PQR5 432 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 NPIPB7O75200 414 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 ZP1P60852 638 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 AESQ08117 197 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 MELKQ14680 651 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 GDF6Q6KF10 455 aaPredicted RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 MYPOPQ86VE0 399 aaPredicted RBP5.64□□□□□ -1.51
CLK3-212ENST00000563418 MDGA1Q8NFP4 955 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 WDR34Q96EX3 536 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 PECRQ9BY49 303 aa5.64□□□□□ -1.51
CLK3-212ENST00000563418 VSIG10L2P0DP72 767 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SELLP14151 372 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 LPAR6P43657 344 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PCBP3P57721 371 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 UBE2NP61088 152 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 RPS23P62266 143 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 DCAF12L2Q5VW00 463 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 ZG16BQ96DA0 208 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TRIB1Q96RU8 372 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 DMRTA2Q96SC8 542 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TWSG1Q9GZX9 223 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 LPAR2Q9HBW0 351 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TAS2R4Q9NYW5 299 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 LOC107986453A0A1B0GWG9 222 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 MEX3DQ86XN8 651 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 OR10G8Q8NGN5 311 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 OR10G6Q8NH81 332 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 DERL1Q9BUN8 251 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TMEM272A0A1B0GTI8 110 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SLC38A8A6NNN8 435 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 MT-ATP6P00846 226 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SOD3P08294 240 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 CTSEP14091 401 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 MMP9P14780 707 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 GALNSP34059 522 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 GNG4P50150 75 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 CKS1BP61024 79 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 BTG2P78543 158 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 AADACL3Q5VUY0 350 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TMEM225Q6GV28 225 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PARM1Q6UWI2 310 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TNFRSF13CQ96RJ3 184 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PLA2G12AQ9BZM1 189 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 UMODP07911 640 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 MLC1Q15049 377 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PDGFRLQ15198 375 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SDHAF4Q5VUM1 108 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PARS2Q7L3T8 475 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 SOCS7O14512 581 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 APBB3O95704 486 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 LCATP04180 440 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 HTR1DP28221 377 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SPINT3P49223 89 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PITX1P78337 314 aaPredicted RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 OR10W1Q8NGF6 305 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PIPOXQ9P0Z9 390 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 EMC9Q9Y3B6 208 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 CDIPTO14735 213 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 HIST1H1TP22492 207 aaPredicted RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 CTSSP25774 331 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 G6PCP35575 357 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 KIR3DL2P43630 455 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SLC6A12P48065 614 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 SERF2P84101 59 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 DUSP28Q4G0W2 176 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 PYY3Q5JQD4 70 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 MRPL38Q96DV4 380 aaKnown RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 TIMM10BQ9Y5J6 103 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 ARID1BQ8NFD5 2236 aaPredicted RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 CTSDP07339 412 aaPredicted RBP5.63□□□□□ -1.51
CLK3-212ENST00000563418 UBE2G1P62253 170 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 TMEM91Q6ZNR0 172 aa5.63□□□□□ -1.51
CLK3-212ENST00000563418 GPRIN1Q7Z2K8 1008 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms