RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 OPN1LWP04000 364 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 HPNP05981 417 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 CTSDP07339 412 aaPredicted RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 RBMXP38159 391 aaKnown RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 ENDOGQ14249 297 aaKnown RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 OR4A4PQ8NGN8 299 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 ROBO4Q8WZ75 1007 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 NAA11Q9BSU3 229 aaPredicted RBP11.49□□□□□ -0.57
USB1-207ENST00000563149 CNTNAP3Q9BZ76 1288 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 TREM1Q9NP99 234 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 DECR2Q9NUI1 292 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 ZNF175Q9Y473 711 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
USB1-207ENST00000563149 DHRS7CA6NNS2 312 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 SDCBPO00560 298 aaPredicted RBP11.48□□□□□ -0.57
USB1-207ENST00000563149 GAPDHP04406 335 aaKnown RBP11.48□□□□□ -0.57
USB1-207ENST00000563149 FCGR2AP12318 317 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 SULT1A2P50226 295 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 CAV2P51636 162 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 SHBQ15464 509 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 UBE2V2Q15819 145 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 GUCA2BQ16661 112 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 HFEQ30201 348 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 H3F3CQ6NXT2 135 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 RAB11FIP2Q7L804 512 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 C1QL2Q7Z5L3 287 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 SGPP2Q8IWX5 399 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 LINC00518Q8N0U6 118 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
USB1-207ENST00000563149 CPNE2Q96FN4 548 aaPredicted RBP11.48□□□□□ -0.57
USB1-207ENST00000563149 CHCHD2Q9Y6H1 151 aaPredicted RBP11.48□□□□□ -0.57
USB1-207ENST00000563149 E9PLN8 166 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 DHHO43323 396 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 HTR3BO95264 441 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 CST4P01036 141 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 HEXAP06865 529 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 HKR1P10072 659 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 PI3P19957 117 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 PVALBP20472 110 aaPredicted RBP11.47□□□□□ -0.57
USB1-207ENST00000563149 SERPINA2P20848 420 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 ANOS1P23352 680 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
USB1-207ENST00000563149 STARD6P59095 220 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
USB1-207ENST00000563149 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 NABP1Q96AH0 204 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 LIN37Q96GY3 246 aaPredicted RBP11.47□□□□□ -0.57
USB1-207ENST00000563149 MICU1Q9BPX6 476 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 TAF9BQ9HBM6 251 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 KNL1Q8NG31 2342 aa11.47□□□□□ -0.57
USB1-207ENST00000563149 LOC102723996A0A087X1L8 192 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 F5H5K5 113 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 JTBO76095 146 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 IFNA21P01568 189 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 HOXB5P09067 269 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 PTGER4P35408 488 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 AKR1C2P52895 323 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 AKR1C1Q04828 323 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 RBM39Q14498 530 aaKnown RBP11.46□□□□□ -0.57
USB1-207ENST00000563149 SMAD2Q15796 467 aaKnown RBP11.46□□□□□ -0.57
USB1-207ENST00000563149 OPN5Q6U736 354 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 PPP1R3BQ86XI6 285 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 SULF2Q8IWU5 870 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 SPSB1Q96BD6 273 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 SHDQ96IW2 340 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 Q96M66 194 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 NRIP2Q9BQI9 281 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 PIGQQ9BRB3 760 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 WDR54Q9H977 334 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 RHOFQ9HBH0 211 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 OR2S2Q9NQN1 319 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 PARP11Q9NR21 331 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 ZFP57Q9NU63 452 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 MLXQ9UH92 298 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 NXT1Q9UKK6 140 aaKnown RBP11.46□□□□□ -0.57
USB1-207ENST00000563149 HSF4Q9ULV5 492 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 PIGLQ9Y2B2 252 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.57
USB1-207ENST00000563149 IGHV5-10-1A0A0J9YXX1 117 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 CRYM-AS1A6NIL9 109 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 NPIPA2E9PIF3 369 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 NPIPA3F8WFD2 350 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 M0R135 149 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 SERPINA5P05154 406 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 ZNF708P17019 499 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 DSCR4P56555 118 aaPredicted RBP11.46□□□□□ -0.58
USB1-207ENST00000563149 S100A10P60903 97 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.58
USB1-207ENST00000563149 PLXDC2Q6UX71 529 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 SEMA6DQ8NFY4 1073 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 OR5D18Q8NGL1 313 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 OR51F2Q8NH61 342 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 FNDC9Q8TBE3 224 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 ZNF799Q96GE5 643 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 METTL9Q9H1A3 318 aa11.46□□□□□ -0.58
USB1-207ENST00000563149 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms