RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MRPS11P82912 194 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SPEM2Q0P670 501 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 MGAT2Q10469 447 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ANKRD55Q3KP44 614 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 CHST4Q8NCG5 386 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 POC1BQ8TC44 478 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ACTR3CQ9C0K3 210 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 GTF2A1LQ9UNN4 478 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 LINC00614P0C842 121 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 PGA4P0DJD7 388 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 PGA5P0DJD9 388 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SLC35A1P78382 337 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF550Q7Z398 422 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ADGRE4PQ86SQ3 457 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF619Q8N2I2 560 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 POC1AQ8NBT0 407 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 ASCL3Q9NQ33 180 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 GPR27Q9NS67 375 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A0B4J2E0 115 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A1B0GX12 115 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SFT2D2O95562 160 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 KLK2P20151 261 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SERPINA2P20848 420 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 DLK1P80370 383 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 WDR38Q5JTN6 314 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 DCAF10Q5QP82 559 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 OPN5Q6U736 354 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 RCBTB1Q8NDN9 531 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 GAL3ST4Q96RP7 486 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 NUDT9Q9BW91 350 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 SOHLH2Q9NX45 425 aa12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-203ENST00000562609 WIPF3A6NGB9 483 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 H0YL77 283 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 AMBPP02760 352 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 MSX1P28360 303 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 DMWDQ09019 674 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 GAGE1Q13065 139 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 ALG10BQ5I7T1 473 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM230Q96A57 120 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 GPR87Q9BY21 358 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 SRA1Q9HD15 236 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 NUP210LQ5VU65 1888 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 A0A087WWC5 75 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 IGHV5-51A0A0C4DH38 117 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 FOXS1O43638 330 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 AGR2O95994 175 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 GIMD1P0DJR0 217 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF708P17019 499 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 CDKN2AP42771 156 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 GABRA4P48169 554 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 PLAURQ03405 335 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 PHF19Q5T6S3 580 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 PEG10Q86TG7 708 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 HOGA1Q86XE5 327 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 AQP3Q92482 292 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 MMABQ96EY8 250 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 C4orf45Q96LM5 186 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 RAB22AQ9UL26 194 aa12.42□□□□□ -0.42
GTF3C1-203ENST00000562609 HEATR5AQ86XA9 2040 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 OR5H8P0DN80 308 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 DPY19L2P2Q6ZN68 376 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 EXD3Q8N9H8 876 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 CDRT4Q8N9R6 151 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 OR6N2Q8NGY6 317 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 RNASEH2CQ8TDP1 164 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 PPP1R14AQ96A00 147 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 ADGRG7Q96K78 797 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 Q9N2J8 555 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 METTL15P1P0C7V9 234 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 PGA3P0DJD8 388 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 RGS19P49795 217 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 RAB38P57729 211 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 PSG6Q00889 435 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 ZNF260Q3ZCT1 412 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 LRRC69Q6ZNQ3 347 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 DPY19L4Q7Z388 723 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 ERGIC1Q969X5 290 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 SPACA7Q96KW9 195 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 TAS2R4Q9NYW5 299 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
GTF3C1-203ENST00000562609 ASCC3Q8N3C0 2202 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-203ENST00000562609 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms