RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 IDH3GP51553 393 aaPredicted RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 RPS27AP62979 156 aaKnown RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 RBPJQ06330 500 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 SNTB2Q13425 540 aaKnown RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 HLXQ14774 488 aaPredicted RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 CEACAM21Q3KPI0 293 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 TIMM23BQ5SRD1 257 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 OLFML2AQ68BL7 652 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 MTFR2Q6P444 385 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 RFPL4BQ6ZWI9 263 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 C1orf174Q8IYL3 243 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 Q8NFD4 153 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 PXT1Q8NFP0 134 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 OR10R2Q8NGX6 335 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 ENKURQ8TC29 256 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 NPRL2Q8WTW4 380 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 PIGCQ92535 297 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 GCDHQ92947 438 aaPredicted RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 BORCS8Q96FH0 119 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 POM121Q96HA1 1249 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 NEURL2Q9BR09 285 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 MARVELD1Q9BSK0 173 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 URM1Q9BTM9 101 aaKnown RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 TM2D1Q9BX74 207 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 TAS2R8Q9NYW2 309 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 IL36GQ9NZH8 169 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 MYEF2Q9P2K5 600 aaKnown RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 ZNF107Q9UII5 783 aaPredicted RBP8.2□□□□□ -1.1
CDH13-205ENST00000562307 ING4Q9UNL4 249 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 MPC1Q9Y5U8 109 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 SPTBN4Q9H254 2564 aa8.2□□□□□ -1.1
CDH13-205ENST00000562307 FAM230AA0A1W2PPH8 454 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PQLC2LA1A4F0 135 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 ZNF850A8MQ14 1090 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 ZNF780AO75290 641 aaPredicted RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 AGFG2O95081 481 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 MPIG6BO95866 241 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 LPLP06858 475 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 TMEM225BP0DP42 221 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 RAC2P15153 192 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 VEGFCP49767 419 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 UCP2P55851 309 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 TMEM50BP56557 158 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PRSS12P56730 875 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PPP1CBP62140 327 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 BTG1P62324 171 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PDZK1IP1Q13113 114 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PRDX4Q13162 271 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 CDNFQ49AH0 187 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PRR30Q53SZ7 412 aaPredicted RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 RNASE12Q5GAN4 147 aaKnown RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 DMRTC1Q5HYR2 192 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PLCXD3Q63HM9 321 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PLET1Q6UQ28 207 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 C3P1Q6ZMU1 363 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 MRGPRGQ86SM5 289 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 SAXO1Q8IYX7 474 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 FTMTQ8N4E7 242 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 ZSCAN4Q8NAM6 433 aaPredicted RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 ACBD4Q8NC06 268 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 STEAP2Q8NFT2 490 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 OR56B1Q8NGI3 324 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 OR5A2Q8NGI9 324 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 CREB3L1Q96BA8 519 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 USB1Q9BQ65 265 aaKnown RBP8.19□□□□□ -1.1
CDH13-205ENST00000562307 TMEM59Q9BXS4 323 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 METTL9Q9H1A3 318 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 MMP28Q9H239 520 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 HRASLSQ9HDD0 168 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDH13-205ENST00000562307 JKAMPQ9P055 326 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 COPZ2Q9P299 210 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 NLKQ9UBE8 527 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 ATMQ13315 3056 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 PTPRQQ9UMZ3 2332 aa8.19□□□□□ -1.1
CDH13-205ENST00000562307 BOD1L1Q8NFC6 3051 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 RTTNQ86VV8 2226 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 IGHV1-18A0A0C4DH31 117 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 A0A0G2JNJ9 132 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 A0A1W2PP11 408 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 TMEM8BA6NDV4 472 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 AKR7A2O43488 359 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 CRTAPO75718 401 aaPredicted RBP8.18□□□□□ -1.1
CDH13-205ENST00000562307 GSTP1P09211 210 aaKnown RBP8.18□□□□□ -1.1
CDH13-205ENST00000562307 CSF1P09603 554 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 CECR9P0C854 216 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 SFTPCP11686 197 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 MGMTP16455 207 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 SELEP16581 610 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 IL32P24001 234 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 RAD52P43351 418 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 RAG2P55895 527 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 ACTBP60709 375 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 ACTG1P63261 375 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 GUCA2AQ02747 115 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 ARL6IP1Q15041 203 aa8.18□□□□□ -1.1
CDH13-205ENST00000562307 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms