RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L2P0CJ85 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L3P0CJ86 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L4P0CJ87 422 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L5P0CJ88 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L6P0CJ89 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L7P0CJ90 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 ACKR3P25106 362 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 OCLNQ16625 522 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 ZSCAN26Q16670 478 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 ZIK1Q3SY52 487 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-204ENST00000561065 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4L9Q6RFH8 374 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-204ENST00000561065 C9orf139Q6ZV77 190 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 KCTD8Q6ZWB6 473 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 BCDIN3DQ7Z5W3 292 aaKnown RBP13.25□□□□□ -0.29
LMX1B-204ENST00000561065 FGFRL1Q8N441 504 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 OR1M1Q8NGA1 313 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 RNF170Q96K19 258 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 TECTBQ96PL2 329 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 APOL4Q9BPW4 351 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 FGF23Q9GZV9 251 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-204ENST00000561065 FAM206AQ9NX38 181 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 DUX4Q9UBX2 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 DHRS7CA6NNS2 312 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF850A8MQ14 1090 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 PSMD9O00233 223 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 ADAM20O43506 726 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 LHBP01229 141 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 GYPAP02724 150 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 LIPFP07098 398 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 MUC1P15941 1255 aaPredicted RBP13.24□□□□□ -0.29
LMX1B-204ENST00000561065 CFHR2P36980 270 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 FGF12P61328 243 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 PRDX4Q13162 271 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 OR5A2Q8NGI9 324 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF671Q8TAW3 534 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 TAF15Q92804 592 aaKnown RBP eCLIP13.24□□□□□ -0.29
LMX1B-204ENST00000561065 SEH1LQ96EE3 360 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 LYZL4Q96KX0 146 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 GPR84Q9NQS5 396 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 OR52A1Q9UKL2 312 aa13.24□□□□□ -0.29
LMX1B-204ENST00000561065 LOC100130705A0A1B0GUX0 176 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 M0R129 80 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 DHRS3O75911 302 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 SERPINA3P01011 423 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 SFTPBP07988 381 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 MMP9P14780 707 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 PRTN3P24158 256 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 GNG3P63215 75 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF684Q5T5D7 378 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 TEX36Q5VZQ5 186 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 WDR82Q6UXN9 313 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 BRD3OSQ6XYD6 125 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 ELMOD2Q8IZ81 293 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 OR5P3Q8WZ94 311 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 C12orf43Q96C57 262 aaKnown RBP13.23□□□□□ -0.29
LMX1B-204ENST00000561065 ITPKCQ96DU7 683 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 FAM71F1Q96KD3 344 aaPredicted RBP13.23□□□□□ -0.29
LMX1B-204ENST00000561065 MS4A7Q9GZW8 240 aaPredicted RBP13.23□□□□□ -0.29
LMX1B-204ENST00000561065 RASSF4Q9H2L5 321 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 COPS3Q9UNS2 423 aa13.23□□□□□ -0.29
LMX1B-204ENST00000561065 A0A1B0GVI7 797 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
LMX1B-204ENST00000561065 DAPL1A0PJW8 107 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 GPR37O15354 613 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
LMX1B-204ENST00000561065 FADS2O95864 444 aaKnown RBP13.22□□□□□ -0.29
LMX1B-204ENST00000561065 ECDO95905 644 aaPredicted RBP13.22□□□□□ -0.29
LMX1B-204ENST00000561065 NRASP01111 189 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 BAMBIQ13145 260 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 CEACAM21Q3KPI0 293 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 KLHL22Q53GT1 634 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 RUSC1-AS1Q66K80 236 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 ACBD7Q8N6N7 88 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 LRRC29Q8WV35 223 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 HPSE2Q8WWQ2 592 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 TBX15Q96SF7 602 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 TBX5Q99593 518 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 TLNRD1Q9H1K6 362 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 PLEKHA1Q9HB21 404 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 PIGLQ9Y2B2 252 aa13.22□□□□□ -0.29
LMX1B-204ENST00000561065 DLGAP1O14490 977 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 CDIPTO14735 213 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 ENTPD6O75354 484 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 RPP14O95059 124 aaKnown RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 HKR1P10072 659 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 AMY2BP19961 511 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 ACTA2P62736 377 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 ACTG2P63267 376 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 SLC9A3R2Q15599 337 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms