RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 A0A1B0GTI1 187 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 E7EQL1 145 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 ICMTO60725 284 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 SC5DO75845 299 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 HCKP08631 526 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 CELA3BP08861 270 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 ZNF35P13682 527 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 RAC2P15153 192 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 PRKACBP22694 351 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 S100A5P33763 92 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 CAPZA1P52907 286 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 ZNF92Q03936 586 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 MZT1Q08AG7 82 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 GK2Q14410 553 aaPredicted RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 SPCS2Q15005 226 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 CNN3Q15417 329 aaKnown RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 CLVS2Q5SYC1 327 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 RGS7BPQ6MZT1 257 aaPredicted RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 PIAS4Q8N2W9 510 aaPredicted RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 NKAIN3Q8N8D7 197 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 PNLDC1Q8NA58 520 aaKnown RBP10.08□□□□□ -0.8
LDLR-212ENST00000560467 OR13C5Q8NGS8 318 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 OR14K1Q8NGZ2 314 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 OR2AE1Q8NHA4 323 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 NDNFQ8TB73 568 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 MRI1Q9BV20 369 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 SLC22A4Q9H015 551 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 PLGRKTQ9HBL7 147 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 PTTG2Q9NZH5 202 aa10.08□□□□□ -0.8
LDLR-212ENST00000560467 FREM1Q5H8C1 2179 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 IGHV2OR16-5A0A0B4J2B6 119 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.07□□□□□ -0.8
LDLR-212ENST00000560467 A0A1W2PPW3 197 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 ANKRD61A6NGH8 418 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 HAX1O00165 279 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 NGFP01138 241 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 MAS1P04201 325 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 ZNF182P17025 639 aaPredicted RBP10.07□□□□□ -0.8
LDLR-212ENST00000560467 BDKRB2P30411 391 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 RPS19P39019 145 aaKnown RBP10.07□□□□□ -0.8
LDLR-212ENST00000560467 WNT5AP41221 380 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 DSCR9P59020 149 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 FAM3AP98173 230 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 FOXB2Q5VYV0 432 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 FBXW12Q6X9E4 464 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 OR1M1Q8NGA1 313 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 OR51A4Q8NGJ6 313 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 OR10AC1Q8NH08 325 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 MCFD2Q8NI22 146 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 ACOT12Q8WYK0 555 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 RGP1Q92546 391 aaPredicted RBP10.07□□□□□ -0.8
LDLR-212ENST00000560467 SLC25A46Q96AG3 418 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 CMBLQ96DG6 245 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 GPER1Q99527 375 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 S100A13Q99584 98 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 DHRS9Q9BPW9 319 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 SHARPINQ9H0F6 387 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 CBLN4Q9NTU7 201 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
LDLR-212ENST00000560467 ZNF319Q9P2F9 582 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 V9GY05 133 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 V9GYS6 101 aa10.07□□□□□ -0.8
LDLR-212ENST00000560467 PLSCR5A0PG75 271 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CD300LBA8K4G0 201 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SULT1B1O43704 296 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 TIMM8AO60220 97 aaPredicted RBP10.06□□□□□ -0.8
LDLR-212ENST00000560467 LY6HO94772 140 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 NRASP01111 189 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SLC25A16P16260 332 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 FSTP19883 344 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 GLRXP35754 106 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 FABP6P51161 128 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 HGFACQ04756 655 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 HNRNPA0Q13151 305 aaKnown RBP10.06□□□□□ -0.8
LDLR-212ENST00000560467 SNTB2Q13425 540 aaKnown RBP10.06□□□□□ -0.8
LDLR-212ENST00000560467 INSL4Q14641 139 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 ZNF404Q494X3 552 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 IDNKQ5T6J7 187 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CYB5R2Q6BCY4 276 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 RFPL4BQ6ZWI9 263 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 UTS2BQ765I0 119 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CDH26Q8IXH8 852 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 ZNF101Q8IZC7 436 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 MUC15Q8N387 334 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 PAQR4Q8N4S7 273 aaPredicted RBP10.06□□□□□ -0.8
LDLR-212ENST00000560467 JAGN1Q8N5M9 183 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 OR8S1Q8NH09 359 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SYNPRQ8TBG9 265 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SLC25A40Q8TBP6 338 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 C10orf105Q8TEF2 133 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 PIGCQ92535 297 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 FAM168AQ92567 244 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SPSB1Q96BD6 273 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms