RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PCDHGB5Q9Y5G0 923 aa13.34□□□□□ -0.27
HERC1-207ENST00000560316 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
HERC1-207ENST00000560316 COMMD3-BMI1R4GMX3 469 aa13.34□□□□□ -0.27
HERC1-207ENST00000560316 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 ZNF850A8MQ14 1090 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 ZNF878C9JN71 531 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 JUNBP17275 347 aaPredicted RBP13.33□□□□□ -0.28
HERC1-207ENST00000560316 RPL31P62899 125 aaKnown RBP13.33□□□□□ -0.28
HERC1-207ENST00000560316 LIPEQ05469 1076 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 PRDX4Q13162 271 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 SSX2Q16385 188 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 LDLRAD2Q5SZI1 272 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 TMEM200BQ69YZ2 307 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 FAM57BQ71RH2 274 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 CSNK2A3Q8NEV1 391 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 OR4M1Q8NGD0 313 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 OR5P3Q8WZ94 311 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 MYDGFQ969H8 173 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 RNF170Q96K19 258 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 FUZQ9BT04 418 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 PITPNC1Q9UKF7 332 aa13.33□□□□□ -0.28
HERC1-207ENST00000560316 C3orf84H3BNL1 204 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 ZNF593O00488 134 aaPredicted RBP13.32□□□□□ -0.28
HERC1-207ENST00000560316 IDH3BO43837 385 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 ALDOBP05062 364 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 ARG1P05089 322 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 CHRM2P08172 466 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 RHCEP18577 417 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 DCTDP32321 178 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 ENTPD1P49961 510 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 SLC25A1P53007 311 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 PRSS45Q7RTY3 260 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 CENPVQ7Z7K6 275 aaPredicted RBP13.32□□□□□ -0.28
HERC1-207ENST00000560316 SLC15A3Q8IY34 581 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 LINC00471Q8N535 108 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 ZNF511Q8NB15 262 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 HPSE2Q8WWQ2 592 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 DPF1Q92782 380 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 CHID1Q9BWS9 393 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 BRD7Q9NPI1 651 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 DNAJC27Q9NZQ0 273 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 MPC1Q9Y5U8 109 aa13.32□□□□□ -0.28
HERC1-207ENST00000560316 F2RL2O00254 374 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 CLIC3O95833 236 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
HERC1-207ENST00000560316 NCK1P16333 377 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 ACKR3P25106 362 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 HSD11B1P28845 292 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 ZNF121P58317 390 aaPredicted RBP13.31□□□□□ -0.28
HERC1-207ENST00000560316 GRB2P62993 217 aaKnown RBP13.31□□□□□ -0.28
HERC1-207ENST00000560316 ZNF273Q14593 569 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 FAM76BQ5HYJ3 339 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 KHDC1LQ5JSQ8 128 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 OR2T4Q8NH00 348 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 PIGCQ92535 297 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 FAM162AQ96A26 154 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 DHRS1Q96LJ7 313 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 USE1Q9NZ43 259 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 LRP12Q9Y561 859 aa13.31□□□□□ -0.28
HERC1-207ENST00000560316 A0A1W2PPH5 198 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 DHRS12A0PJE2 317 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 CFL1P23528 166 aaKnown RBP13.3□□□□□ -0.28
HERC1-207ENST00000560316 SLC15A1P46059 708 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 GPM6AP51674 278 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 C10orf99Q6UWK7 81 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 THAP5Q7Z6K1 395 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 OR2T27Q8NH04 317 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 FOXRED1Q96CU9 486 aaPredicted RBP13.3□□□□□ -0.28
HERC1-207ENST00000560316 RCN3Q96D15 328 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 MALSU1Q96EH3 234 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 OR10A2Q9H208 303 aa13.3□□□□□ -0.28
HERC1-207ENST00000560316 INTS9Q9NV88 658 aaKnown RBP13.3□□□□□ -0.28
HERC1-207ENST00000560316 TBL2Q9Y4P3 447 aaKnown RBP13.3□□□□□ -0.28
HERC1-207ENST00000560316 hCG_1809904A0A1W2PP81 198 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 A0A1W2PPE2 198 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 A0A1W2PR64 198 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 A0A1W2PRV1 198 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 ODF3BA8MYP8 253 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 NME4O00746 187 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 EDF1O60869 148 aaKnown RBP13.29□□□□□ -0.28
HERC1-207ENST00000560316 GYPBP06028 91 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 FMO3P31513 532 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 SF3A3Q12874 501 aaKnown RBP eCLIP13.29□□□□□ -0.28
HERC1-207ENST00000560316 DCTN2Q13561 401 aaKnown RBP13.29□□□□□ -0.28
HERC1-207ENST00000560316 EIF2B1Q14232 305 aaKnown RBP13.29□□□□□ -0.28
HERC1-207ENST00000560316 TIGD4Q8IY51 512 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 FTMTQ8N4E7 242 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 CD177Q8N6Q3 437 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 OR52H1Q8NGJ2 320 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 PGAM5Q96HS1 289 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 SIKE1Q9BRV8 207 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 GPR61Q9BZJ8 451 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
HERC1-207ENST00000560316 AP3M1Q9Y2T2 418 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms