RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 HCP5Q6MZN7 132 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 C11orf88Q6PI97 169 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 CRIP3Q6Q6R5 217 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 CYP2R1Q6VVX0 501 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 Q6ZTK2 550 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 OR5D13Q8NGL4 314 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 OTOSQ8NHW6 89 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 CFHR4Q92496 578 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 SSX3Q99909 188 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 MAGIXQ9H6Y5 334 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 RANBP3Q9H6Z4 567 aaPredicted RBP10.68□□□□□ -0.7
TPM1-220ENST00000559556 NLKQ9UBE8 527 aa10.68□□□□□ -0.7
TPM1-220ENST00000559556 IGKV1D-17A0A075B6S4 117 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 TRBV23-1A0A0A0MS06 115 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 G3V4G9 280 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 OPN1MWP04001 364 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 LYNP07948 512 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 OPN1MW2P0DN77 364 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 OPN1MW3P0DN78 364 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 NDUFB7P17568 137 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 KIR2DS4P43632 304 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 PSMA6P60900 246 aaKnown RBP10.67□□□□□ -0.7
TPM1-220ENST00000559556 BLMHQ13867 455 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 AANATQ16613 207 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 LRRC75BQ2VPJ9 315 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 C16orf89Q6UX73 402 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 CD300LDQ6UXZ3 194 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 KRT74Q7RTS7 529 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 CPLX4Q7Z7G2 160 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 ZDHHC23Q8IYP9 409 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 PAPD5Q8NDF8 572 aaKnown RBP10.67□□□□□ -0.7
TPM1-220ENST00000559556 PPP1R35Q8TAP8 253 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 C17orf50Q8WW18 174 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 DUS3LQ96G46 650 aaKnown RBP10.67□□□□□ -0.7
TPM1-220ENST00000559556 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 MEGF9Q9H1U4 602 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 ARL8BQ9NVJ2 186 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 NDE1Q9NXR1 346 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 TAGLN3Q9UI15 199 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 MAB21L2Q9Y586 359 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 U3KQV3 271 aa10.67□□□□□ -0.7
TPM1-220ENST00000559556 GLRA1P23415 457 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 FBLN7Q53RD9 439 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 OR2T5Q6IEZ7 315 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 KCTD8Q6ZWB6 473 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.66□□□□□ -0.7
TPM1-220ENST00000559556 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 ZNRF1Q8ND25 227 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 OR8B12Q8NGG6 310 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 OR51G2Q8NGK0 314 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 OR4C13Q8NGP0 309 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 OR2T29Q8NH02 315 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 PIGCQ92535 297 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 RNF170Q96K19 258 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 FAM107BQ9H098 131 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 FAM234AQ9H0X4 552 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 REEP1Q9H902 201 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 ELL3Q9HB65 397 aaPredicted RBP10.66□□□□□ -0.7
TPM1-220ENST00000559556 RAB18Q9NP72 206 aa10.66□□□□□ -0.7
TPM1-220ENST00000559556 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
TPM1-220ENST00000559556 SAMHD1Q9Y3Z3 626 aaKnown RBP10.66□□□□□ -0.7
TPM1-220ENST00000559556 DNAH9Q9NYC9 4486 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 MEGF11A6BM72 1044 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 ANGPTL7O43827 346 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 SELENOFO60613 162 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 RHBDL1O75783 438 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 PSG2P11465 335 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 PAICSP22234 425 aaKnown RBP10.65□□□□□ -0.7
TPM1-220ENST00000559556 GABRA2P47869 451 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 GPM6AP51674 278 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 GNG3P63215 75 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 LY6EQ16553 131 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 LCN8Q6JVE9 175 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 IQCF1Q8N6M8 205 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 TMEM185AQ8NFB2 350 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 OR5K1Q8NHB7 308 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 OR2T6Q8NHC8 308 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 RORBQ92753 470 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 OTULINQ96BN8 352 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 SDSLQ96GA7 329 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 NIPSNAP1Q9BPW8 284 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 OR51I2Q9H344 312 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 MUC13Q9H3R2 512 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 NIPAL2Q9H841 368 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 FOXJ3Q9UPW0 622 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 ZNF281Q9Y2X9 895 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 SIGLEC9Q9Y336 463 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 LRP12Q9Y561 859 aa10.65□□□□□ -0.7
TPM1-220ENST00000559556 KMT2CQ8NEZ4 4911 aaKnown RBP10.64□□□□□ -0.71
TPM1-220ENST00000559556 A0A0U1RQV5 110 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 ARRDC5A6NEK1 342 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 OR5B21A6NL26 309 aa10.64□□□□□ -0.71
TPM1-220ENST00000559556 H0YAE9 185 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms