RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	DOCK11	Q5JSL3	2073 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	IGHV3OR15-7	A0A075B7D8	119 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	GGT3P	A6NGU5	568 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	ZNF593	O00488	134 aa	Predicted RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	HOXA3	O43365	443 aa	Predicted RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	KCNAB3	O43448	404 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	DENR	O43583	198 aa	Known RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	FCN3	O75636	299 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SPARC	P09486	303 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	ZNF3	P17036	446 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	PAICS	P22234	425 aa	Known RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	MYF6	P23409	242 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	POLR2I	P36954	125 aa	Known RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	CD200	P41217	278 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	KRTAP10-2	P60368	255 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	PRB3	Q04118	309 aa	Predicted RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SRSF4	Q08170	494 aa	Known RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	FOXL1	Q12952	345 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	CRMP1	Q14194	572 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	OR8B8	Q15620	311 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	ZNF181	Q2M3W8	571 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SLC25A30	Q5SVS4	291 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	C12orf73	Q69YU5	71 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	BTNL3	Q6UXE8	466 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	LRRN1	Q6UXK5	716 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	C1orf87	Q8N0U7	546 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	FGFRL1	Q8N441	504 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	OR8J1	Q8NGP2	316 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	OR11L1	Q8NGX0	322 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SGMS2	Q8NHU3	365 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	FAM81A	Q8TBF8	368 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787		Q8TCH9	128 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SLC25A28	Q96A46	364 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	UPRT	Q96BW1	309 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787		Q96MT0	163 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	TECTB	Q96PL2	329 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	PCGF1	Q9BSM1	259 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	COPS4	Q9BT78	406 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	UNKL	Q9H9P5	680 aa	Known RBP	5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	SMURF1	Q9HCE7	757 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	CMC2	Q9NRP2	79 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	C1orf123	Q9NWV4	160 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	CLN8	Q9UBY8	286 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	VWF	P04275	2813 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787	NOTCH1	P46531	2555 aa		5.8	□□□□□ -1.48
MARK3-215	ENST00000558787		A0A1B0GW55	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	ANKRD34B	A5PLL1	514 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	FAM183A	A6NL82	134 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787		A6NLC8	198 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SNTN	A6NMZ2	147 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	LGALS8	O00214	317 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TNFRSF13B	O14836	293 aa	Predicted RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	ADAM20	O43506	726 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	PLAT	P00750	562 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	GYPA	P02724	150 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TFF1	P04155	84 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L2	P0CJ85	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L3	P0CJ86	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L4	P0CJ87	422 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L5	P0CJ88	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L6	P0CJ89	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L7	P0CJ90	424 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SPI1	P17947	270 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	MDK	P21741	143 aa	Predicted RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	EPHA2	P29317	976 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	PSMB10	P40306	273 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	MTNR1A	P48039	350 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	ENTPD1	P49961	510 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SNRPG	P62308	76 aa	Known RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	CSNK2B	P67870	215 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	MED21	Q13503	144 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TAF13	Q15543	124 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SNAPC1	Q16533	368 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	MEDAG	Q5VYS4	303 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TMEM236	Q5W0B7	351 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DUX4L9	Q6RFH8	374 aa	Predicted RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DCDC5	Q6ZRR9	648 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	WDR86	Q86TI4	376 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	GID4	Q8IVV7	300 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	PDZD9	Q8IXQ8	264 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	IQCF1	Q8N6M8	205 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	OR56B2P	Q8NGI1	322 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	OR6K6	Q8NGW6	343 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	OR2T4	Q8NH00	348 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	RHOXF1	Q8NHV9	184 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TMEM163	Q8TC26	289 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	OTULIN	Q96BN8	352 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SGK3	Q96BR1	496 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SLAMF6	Q96DU3	332 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	ZMYND19	Q96E35	227 aa	Predicted RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	SEH1L	Q96EE3	360 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TBX15	Q96SF7	602 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	AMELY	Q99218	206 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	ADAT1	Q9BUB4	502 aa	Known RBP	5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	NMNAT2	Q9BZQ4	307 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	MARCH7	Q9H992	704 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	FN3KRP	Q9HA64	309 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	TVP23B	Q9NYZ1	205 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	DNAJC27	Q9NZQ0	273 aa		5.79	□□□□□ -1.48
MARK3-215	ENST00000558787	RNF7	Q9UBF6	113 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms