RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 KCNK17Q96T54 332 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 OR2M5A3KFT3 312 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 SERPINE2P07093 398 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 PCBD1P61457 104 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 DCAF12Q5T6F0 453 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 SLC25A42Q86VD7 318 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF385AQ96PM9 386 aaKnown RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 SHOXO15266 292 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 EDN3P14138 238 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 CYB561P49447 251 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 ASCL1P50553 236 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 RTL6Q6ICC9 239 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 SLC25A26Q70HW3 274 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 VASH2Q86V25 355 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 NELFAQ9H3P2 528 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 NECAP2Q9NVZ3 263 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 ST3GAL6Q9Y274 331 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 OR2A4O95047 310 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 CMTM1Q8IZ96 169 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 CPT1CQ8TCG5 803 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 RTN4IP1Q8WWV3 396 aaPredicted RBP13.67□□□□□ -0.22
AP4E1-202ENST00000558439 OR2A7Q96R45 310 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 G6PC2Q9NQR9 355 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 EDARQ9UNE0 448 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 GPR31O00270 319 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 ITGB2P05107 769 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 CCL3P10147 92 aa13.67□□□□□ -0.22
AP4E1-202ENST00000558439 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
AP4E1-202ENST00000558439 PUS1Q9Y606 427 aaKnown RBP eCLIP13.67□□□□□ -0.22
AP4E1-202ENST00000558439 TRAPPC2LH3BP13 241 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 RAMP1O60894 148 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 CRHP06850 196 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 EPHA8P29322 1005 aaPredicted RBP13.66□□□□□ -0.22
AP4E1-202ENST00000558439 Q6ZRG5 221 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 SLC36A1Q7Z2H8 476 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 OR1S1Q8NH92 325 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 BCO1Q9HAY6 547 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 C1orf196B1AJZ1 125 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 TO15178 435 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 NHLRC3Q5JS37 347 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 WDR74Q6RFH5 385 aaPredicted RBP13.66□□□□□ -0.22
AP4E1-202ENST00000558439 PLXDC2Q6UX71 529 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 OR52H1Q8NGJ2 320 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 SCGB1C1Q8TD33 95 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 WNT2BQ93097 391 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 FBXW5Q969U6 566 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 HDHD3Q9BSH5 251 aaPredicted RBP13.66□□□□□ -0.22
AP4E1-202ENST00000558439 MCTS1Q9ULC4 181 aaKnown RBP13.66□□□□□ -0.22
AP4E1-202ENST00000558439 FANCMQ8IYD8 2048 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 ICE1Q9Y2F5 2266 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 PLPPR5Q32ZL2 321 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 TEX30Q5JUR7 227 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
AP4E1-202ENST00000558439 PBDC1Q9BVG4 233 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 LUZP4Q9P127 313 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 CYB5R1Q9UHQ9 305 aa13.66□□□□□ -0.22
AP4E1-202ENST00000558439 PI4KAP42356 2102 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 IGKV3D-11A0A0A0MRZ8 115 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 IGHV5-10-1A0A0J9YXX1 117 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 GDF9O60383 454 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ALX4Q9H161 411 aaPredicted RBP13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ADAM10O14672 748 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 DHRS3O75911 302 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 SFT2D2O95562 160 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 IFNA5P01569 189 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 CLDN15P56746 228 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 FNDC7Q5VTL7 733 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 RPS4Y2Q8TD47 263 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 MITD1Q8WV92 249 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ADAT1Q9BUB4 502 aaKnown RBP13.65□□□□□ -0.22
AP4E1-202ENST00000558439 MAGT1Q9H0U3 335 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 C12orf49Q9H741 205 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 HEXA-AS1Q9H8Q6 139 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 PATE3B3GLJ2 98 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 CBR3O75828 277 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 WISP1O95388 367 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF32P17041 273 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 AKR1C8PQ5T2L2 129 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 PP6455Q8WZ26 134 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 THOC3Q96J01 351 aaKnown RBP13.65□□□□□ -0.22
AP4E1-202ENST00000558439 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 LHFPL6Q9Y693 200 aa13.65□□□□□ -0.22
AP4E1-202ENST00000558439 HS3ST1O14792 307 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
AP4E1-202ENST00000558439 ZNF529Q6P280 563 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 OR2M3Q8NG83 312 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 OR10Z1Q8NGY1 313 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 ST7LQ8TDW4 575 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 RDH5Q92781 318 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
AP4E1-202ENST00000558439 BOKQ9UMX3 212 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms