RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 J3QRE1 110 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 CDIPTO14735 213 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 MAGEB4O15481 346 aaPredicted RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 SYT7O43581 403 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 ZNF205O95201 554 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 ECDO95905 644 aaPredicted RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 UBCP0CG48 685 aaKnown RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 CCL1P22362 96 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 ZFP36P26651 326 aaKnown RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 PSMB10P40306 273 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 PITPNBP48739 271 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 CCR9P51686 369 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 GALEQ14376 348 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 RCN1Q15293 331 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 LRRC36Q1X8D7 754 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 CDONQ4KMG0 1287 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 FAM201AQ5SY85 155 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 TEX36Q5VZQ5 186 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 SFRP4Q6FHJ7 346 aaPredicted RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 FDX2Q6P4F2 183 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 WDR82Q6UXN9 313 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 ZNF826PQ6ZT77 177 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 MOB3CQ70IA8 216 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 SSX6Q7RTT6 188 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 SLC36A1Q7Z2H8 476 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 CATSPERDQ86XM0 798 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 ZNF573Q86YE8 665 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 SYS1Q8N2H4 156 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 RFLNBQ8N5W9 214 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 GCSAMQ8N6F7 178 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 BOLLQ8N9W6 283 aaKnown RBP7.09□□□□□ -1.27
TPM1-213ENST00000558400 OR14K1Q8NGZ2 314 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 LRRC29Q8WV35 223 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 RAB40AQ8WXH6 277 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 RORBQ92753 470 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 DMRTB1Q96MA1 342 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 TTTY10Q9BZA0 68 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 DNTTIP1Q9H147 329 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 RASL12Q9NYN1 266 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 KAAG1Q9UBP8 84 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 GNG8Q9UK08 70 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 SLC7A11Q9UPY5 501 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 V9GYS6 101 aa7.09□□□□□ -1.27
TPM1-213ENST00000558400 LOC105371242A0A075B767 164 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 KIR2DS1A0A191URI9 304 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 SRRM5B3KS81 715 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ZNF732B4DXR9 585 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 H0YAE9 185 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 TRAPPC2LH3BP13 241 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 J3QLW9 94 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 P2RY10O00398 339 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 TNFRSF13BO14836 293 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 CASQ2O14958 399 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 GATBO75879 557 aaKnown RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 APOL3O95236 402 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ISG15P05161 165 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 HTR1AP08908 422 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 DBTP11182 482 aaKnown RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 ZNF19P17023 458 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 FPR2P25090 351 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 DCKP27707 260 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 GPM6AP51674 278 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ISL1P61371 349 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ZNF85Q03923 595 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ZNF91Q05481 1191 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 PAX8Q06710 450 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 MED21Q13503 144 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ATPAF1Q5TC12 328 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 PLCXD3Q63HM9 321 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 WDR25Q64LD2 544 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 TMEM42Q69YG0 159 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 SCCPDHQ8NBX0 429 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 OR2G2Q8NGZ5 317 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 CYGBQ8WWM9 190 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 DVL3Q92997 716 aaPredicted RBP7.08□□□□□ -1.28
TPM1-213ENST00000558400 LGALS12Q96DT0 336 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 MED30Q96HR3 178 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 MRI1Q9BV20 369 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 OR51I2Q9H344 312 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 PLEKHA1Q9HB21 404 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 NEK6Q9HC98 313 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 AMBNQ9NP70 447 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 DNAJB11Q9UBS4 358 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 INSIG2Q9Y5U4 225 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 AUP1Q9Y679 476 aa7.08□□□□□ -1.28
TPM1-213ENST00000558400 ZANQ9Y493 2812 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 H0YJX3 145 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 TMPRSS2O15393 492 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 PHF1O43189 567 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 ADAM20O43506 726 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 ENSAO43768 121 aaKnown RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 IGHA1P01876 353 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 ACAA1P09110 424 aaPredicted RBP7.07□□□□□ -1.28
TPM1-213ENST00000558400 FAHP16930 419 aa7.07□□□□□ -1.28
TPM1-213ENST00000558400 FUT6P51993 359 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms