RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 BGLAPP02818 100 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TK1P04183 234 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 MAS1P04201 325 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 AMY2AP04746 511 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CST2P09228 141 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TPT1P13693 172 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 ST6GAL1P15907 406 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CXCL2P19875 107 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CD80P33681 288 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 GUCA1AP43080 201 aaPredicted RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SOX2P48431 317 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 MMP16P51512 607 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 BIDP55957 195 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SLC37A1P57057 533 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NANOS3P60323 173 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NKX6-1P78426 367 aaPredicted RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 C17orf67Q0P5P2 114 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 PLCXD2Q0VAA5 305 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 PJVKQ0ZLH3 352 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 EIF2B1Q14232 305 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SMIM21Q3B7S5 101 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 RNASE12Q5GAN4 147 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM255AQ5JRV8 349 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NCMAPQ5T1S8 102 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 C1orf194Q5T5A4 169 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM225Q6GV28 225 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 FAM166AQ6J272 317 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF774Q6NX45 483 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 Q6ZTK2 550 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 DPY19L4Q7Z388 723 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NUFIP2Q7Z417 695 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TMED4Q7Z7H5 227 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 LYG2Q86SG7 212 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SLC25A42Q86VD7 318 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CATSPERDQ86XM0 798 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 PLXDC1Q8IUK5 500 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 MRPL41Q8IXM3 137 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 C9orf40Q8IXQ3 194 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 KDM8Q8N371 416 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CLEC1AQ8NC01 280 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TMEM52Q8NDY8 209 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 OR51L1Q8NGJ5 315 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 OR51S1Q8NGJ8 323 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 OR1J1Q8NGS3 322 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 OR4C3Q8NH37 302 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 OR14L1PQ8NHC6 308 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 MFSD8Q8NHS3 518 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 RNF141Q8WVD5 230 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 HPSE2Q8WWQ2 592 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 C10orf35Q96D05 121 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SLC25A44Q96H78 314 aaPredicted RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 CLUHP3Q96NS8 147 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TECTBQ96PL2 329 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TSPAN32Q96QS1 320 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 ALKBH7Q9BT30 221 aaPredicted RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NMES1Q9C002 83 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 GPR27Q9NS67 375 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 C2orf42Q9NWW7 574 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 P4HTMQ9NXG6 502 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 FOXJ2Q9P0K8 574 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 PIPOXQ9P0Z9 390 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 RCC2Q9P258 522 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 LRIT1Q9P2V4 623 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SUSD2Q9UGT4 822 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 IL17BQ9UHF5 180 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF346Q9UL40 294 aaKnown RBP4.9□□□□□ -1.63
GABPB1-207ENST00000558335 NPIPA1Q9UND3 350 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 SLC5A6Q9Y289 635 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 B3GALT5Q9Y2C3 310 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TIMM10BQ9Y5J6 103 aa4.9□□□□□ -1.63
GABPB1-207ENST00000558335 TP53BP1Q12888 1972 aaPredicted RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TMED7-TICAM2A0A0A6YYA0 188 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 A0A1B0GTI1 187 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 A0A1W2PPC4 97 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ANKUB1A6NFN9 424 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 TVP23AA6NH52 213 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 OR5H14A6NHG9 310 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 A6NIN4 97 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CCDC85CA6NKD9 419 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 VSTM2BA6NLU5 285 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 C9J4A7 227 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 PHOX2AO14813 284 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 FOXS1O43638 330 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 NARSO43776 548 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 DOK2O60496 412 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 SLC16A7O60669 478 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 RAMP3O60896 148 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CA11O75493 328 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 DUS4LO95620 317 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 EML2O95834 649 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CA3P07451 260 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 H2BFMP0C1H6 154 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 RD3LP0DJH9 198 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 CD79AP11912 226 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF35P13682 527 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 NME1P15531 152 aaKnown RBP4.89□□□□□ -1.63
GABPB1-207ENST00000558335 ZNF20P17024 532 aa4.89□□□□□ -1.63
GABPB1-207ENST00000558335 IGFBP3P17936 291 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms