RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TRAV18A0A075B6X5 111 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 A0A1W2PP11 408 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 A0A1W2PR80 420 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 RAB27BO00194 218 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ORC5O43913 435 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 PFDN1O60925 122 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 WDR1O75083 606 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 RAD51DO75771 328 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 CNOT4O95628 575 aaKnown RBP6.35□□□□□ -1.39
SPG11-204ENST00000557866 SERPINA5P05154 406 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 TPOP07202 933 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 HCKP08631 526 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 NAT2P11245 290 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ZNF14P17017 642 aaPredicted RBP6.35□□□□□ -1.39
SPG11-204ENST00000557866 CCNOP22674 350 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ZP1P60852 638 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 CD300CQ08708 224 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 PMPCAQ10713 525 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 HLXQ14774 488 aaPredicted RBP6.35□□□□□ -1.39
SPG11-204ENST00000557866 OR8B8Q15620 311 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 KISS1Q15726 138 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 GSG1Q2KHT4 349 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 PLA1AQ53H76 456 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 FBLN7Q53RD9 439 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 TMEM255AQ5JRV8 349 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 HACD4Q5VWC8 232 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 AWAT2Q6E213 333 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ZNF474Q6S9Z5 364 aaPredicted RBP6.35□□□□□ -1.39
SPG11-204ENST00000557866 FAM180AQ6UWF9 173 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 GLIPR1L1Q6UWM5 242 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 C3P1Q6ZMU1 363 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 TMEM104Q8NE00 496 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 DUSP18Q8NEJ0 188 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 FAM57AQ8TBR7 257 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 AKAP1Q92667 903 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPG11-204ENST00000557866 PIGTQ969N2 578 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 FAM46BQ96A09 425 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 PTX4Q96A99 478 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 CMBLQ96DG6 245 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 BOD1Q96IK1 185 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 NEURL2Q9BR09 285 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ATG5Q9H1Y0 275 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 RGCCQ9H4X1 137 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 DIABLOQ9NR28 239 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 PTTG3PQ9NZH4 202 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 KLK11Q9UBX7 282 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ZNF391Q9UJN7 358 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 ELF5Q9UKW6 265 aaPredicted RBP6.35□□□□□ -1.39
SPG11-204ENST00000557866 CACNG2Q9Y698 323 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 FREM1Q5H8C1 2179 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 CEP295Q9C0D2 2601 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 A0A0A6YYH2 397 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 A0A0B4J293 547 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 A6NJ64 397 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 RGS13O14921 159 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 XRCC2O43543 280 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 NRASP01111 189 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 CRHP06850 196 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 GLI4P10075 376 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 SLC6A1P30531 599 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 CEACAM8P31997 349 aaPredicted RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 PTGER4P35408 488 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 APLNRP35414 380 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 TIMP3P35625 211 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 PTGFRP43088 359 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ALDH3B1P43353 468 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 INPP1P49441 399 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 UCNP55089 124 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 PER3P56645 1201 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 UBE2NP61088 152 aaKnown RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 CXADRP78310 365 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 MRPS10P82664 201 aaKnown RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 TGFBR3Q03167 851 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 PLP2Q04941 152 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 GK2Q14410 553 aaPredicted RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 CARTPTQ16568 116 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ZNF260Q3ZCT1 412 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 CLVS2Q5SYC1 327 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 MZT2BQ6NZ67 158 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 RFPL4BQ6ZWI9 263 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 KRT74Q7RTS7 529 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 OR2W3Q7Z3T1 314 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 CXorf67Q86X51 503 aaPredicted RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 DOLPP1Q86YN1 238 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 CCDC36Q8IYA8 594 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ZNF101Q8IZC7 436 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ACBD4Q8NC06 268 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 C1orf162Q8NEQ5 155 aaPredicted RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 SLC30A7Q8NEW0 376 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 OR56B2PQ8NGI1 322 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 OR10K1Q8NGX5 313 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 ENKURQ8TC29 256 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 GPX8Q8TED1 209 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 AQP3Q92482 292 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 APOBEC3DQ96AK3 386 aaPredicted RBP6.34□□□□□ -1.39
SPG11-204ENST00000557866 SPSB1Q96BD6 273 aa6.34□□□□□ -1.39
SPG11-204ENST00000557866 UPRTQ96BW1 309 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms